chr5_22

cmsearch-Rfam

Family :

mir-497

Id:

RF00793

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00793

Description:

not description

Score:

34.2

E-value:

0.0022

From sequence:

85951

To sequence:

85841

Alignments:

                                                        v          v                                               NC
                :::::::::<<<<<<<<-<<<-<-<<<<-<<<<-<<<<<<<<<~~~~~~>>>>>>>>>->>>>->>>>->->>>->>>>>>>>::::::::::::::: CS
  RF00793     1 ccacuCcaguCccgCccCCGCcCCagCaGCaCaCuGuGGuuuG*[20]*CaaaCCaCaCuGuGGuGuuAGAGCGAggGuggGgGAGGcAcCgcugagg 112  
                 C  +    :CC::CCC CGC+C :::: ::C:C::UG : :        : : CA::C:G::G::::AGAGCG GGG::GG:G  G A  G  +   
     chr5 85951 GCGUCUUCCCCCUCCCCGCGCUCUUCACCGUCGCCCUGUGCCU*[19]*AGUCACAGGCCGACGGUGAAGAGCGCGGGGAGGGGGAGGAGAGAGACCA 85841
                **************************************98665...9..56689******************************************** PP

>>

RNAfold
>chr5_22
UGGUCUCUCUCCUCCCCCUCCCCGCGCUCUUCACCGUCGGCCUGUGACUU
UGACGAAUACAUGAGAGAAGGCACAGGGCGACGGUGAAGAGCGCGGGGAG
GGGGAAGACGCA
..((((......(((((((((((((((((((((((((((.((((((.((((..(..........)..)))))))))).)))))))))))))))))))))))))))))))... (-83.70)

Length sequence

: 112

Length match:

109