chr5_26

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

32.9

E-value:

0.00084

From sequence:

119977

To sequence:

119865

Alignments:

                                vvv   v                                      v vvv                  NC
                 :<<<<-<<-<<-<<<<<<<--<<<<<<<<<<<-<<<___~~~~~~>>>-->>>>>>>>>>>>>>>>>>->->>>-..>>>>: CS
  RF00891      1 GGaagAgGAGGAaGCCCuGGAgGggCuGGaGGUgauGGA*[ 1]*guuUUCCuCCgGuuCuCaGGGCuCCACCuc..uuuCG 75    
                 GGAA:AGG GG AG:   G   :::C:GG:GG G::GGA      ::UU CC:CC:G::: C+  :CU CACCUC  :UUCG
     chr5 119977 GGAAGAGGGGGGAGA---GAGAAGACGGGGGGGGGCGGA*[40]*GCUUCCCCCCCGUCUCCUCCUCUUCACCUCucCUUCG 119865
                 *************97...445677888888888888875...*..88888888888888888999*******664339**** PP

>>

RNAfold
>chr5_26
GAAGGAGAGGUGAAGAGGAGGAGACGGGGGGGAAGCGGAGAAGAGAUGGC
CACCGUCACUUACUCGCUCUCUUCUCUCCGCCCCCCCCCGUCUUCUCUCU
CCCCCCUCUUCC
...(((((((.(..((((((((((((((((((..(((((((.((((.(((...............))).)))).))))))).))))))))))))))).)))..)))))))). (-68.20)

Length sequence

: 112

Length match:

111