chr5_27

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

30.8

E-value:

0.0032

From sequence:

54327

To sequence:

54387

Alignments:

                                                                     NC
                :<<<<-<<-<<-<<<<<<<--<<<~~~~~~>>>>>>>>>>->->>>->>>>: CS
  RF00891     1 GGaagAgGAGGAaGCCCuGGAgGg*[29]*uCuCaGGGCuCCACCucuuuCG 75   
                GG:A: :G GGA:G::C GGA:GG      UC:C G::C:CC CC:C:U:C 
     chr5 54327 GGGAGUGGGGGAGGGACGGGAUGG*[15]*UCACUGUCCCCCUCCCCCUCCU 54387
                ***********************8...8..8********************* PP

>>

RNAfold
>chr5_27
CAGGAAGGGAGUGGGGGAGGGACGGGAUGGCCGAUUUGGAGGGAAUCACU
GUCCCCCUCCCCCUCCUCUUUUCU
..(((((((((.(((((((((...((((((..(((((.....))))).)))))))))))))))..))))))))) (-40.80)

Length sequence

: 74

Length match:

59