chr5_42

cmsearch-Rfam

Family :

TB9Cs3H2

Id:

RF01556

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01556

Description:

not description

Score:

74.9

E-value:

5.2e-16

From sequence:

436980

To sequence:

437043

Alignments:

                                                                                  NC
                 :<<<<<--------<<<<<<<<----<__.____>---->>>>>>>>-------->>>>>:::: CS
  RF01556      1 AGUGCCcUCAGGUAauGuGguGaUuGugu.uCccaUCagCacCaCagGUUCAAGaGGCACgAGA 63    
                 AGUGCC  CAGGUA::G:G::GAU GUGU  C+CAUC GC::C:C::GUUCAAG GGCACGAGA
     chr5 436980 AGUGCCGCCAGGUAAAGCGGCGAUGGUGUgCCUCAUCCGCGUCGCUUGUUCAAGCGGCACGAGA 437043
                 *****************************9999******************************* PP

>>

RNAfold
>chr5_42
GUGCCGCCAGGUAAAGCGGCGAUGGUGUGCCUCAUCCGCGUCGCUUGUUC
AAGCGGCACGAGA
(((((((..((..((((((((..((((.....))))..))))))))..))..))))))).... (-32.00)

Length sequence

: 63

Length match:

62