chr5_7

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

33.7

E-value:

0.0095

From sequence:

119979

To sequence:

119867

Alignments:

                            v                                                            v          NC
                 :<<<-<<<<<-<<<<<<--<<<<<<<<<<<<<<<<-<__~~~~~~>->>>>>->>>>>>>>>.->>->>>>>>>>>>>>>>: CS
  RF00802      1 gagGcaGggGCGaGGgGCUGcggGgGgagCcggGCGGAG*[ 4]*CGGCcugcGcuuCcCcc.ggCUCcCCuCCccCuCcuU 79    
                 +:GG AG:GG  :::G:  G::G::G::G::G:GCGGAG      C GC:U:C:C::C::C:  :C :C::: CC:CUCC:U
     chr5 119979 AGGGAAGAGGGGGGAGAGAGAAGACGGGGGGGGGCGGAG*[37]*CCGCUUCCCCCCCGUCUcCUCCUCUUCACCUCUCCUU 119867
                 **********99999999999****************98...*..*****************55888888888********* PP

RNAfold
>chr5_7
AGGAGAGGUGAAGAGGAGGAGACGGGGGGGAAGCGGAGAAGAGAUGGCCA
CCGUCACUUACUCGCUCUCUUCUCUCCGCCCCCCCCCGUCUUCUCUCUCC
CCCCUCUUCCCU
.(((((((.(..((((((((((((((((((..(((((((.((((.(((...............))).)))).))))))).))))))))))))))).)))..))))))))... (-68.20)

Length sequence

: 112

Length match:

111