chr6_1

cmsearch-Rfam

Family :

mir-14

Id:

RF00752

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00752

Description:

not description

Score:

29.4

E-value:

0.0026

From sequence:

310496

To sequence:

310434

Alignments:

                   v                 v   v                 v   v                 v   NC
                 <<<<<<<<-<<<<--<<<<<<-<<<<_______________>>>>->>>>>>-->>>>->>>>>>>> CS
  RF00752      1 uGUGGGAGCGAGAuuaaGaCUuaCUgGUuaUaCuUuuuAaguAGuCAGuCuuUUUCUCUCUCCUAUa 67    
                 :G :GGAG GAG: +:AGA   :C G    +       A GU G:C  UCU: U:CUCUCUCC: U:
     chr6 310496 GGUGGGAGAGAGGAGGAGAGAGGCAG----CCAGGCGGACGUCGCCCCUCUCCUCCUCUCUCCCUUC 310434
                 *******************9999987....666667777778899999******************* PP

>>

RNAfold
>chr6_1
CGAAGGGAGAGAGGAGGAGAGGGGCGACGUCCGCCUGGCUGCCUCUCUCC
UCCUCUCUCCCACCAA
....((((((((((((((((((((((..(((.....)))))))))))))))))))))))))..... (-48.80)

Length sequence

: 66

Length match:

61