chr6_11

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.6

E-value:

0.0015

From sequence:

441394

To sequence:

441284

Alignments:

                  v                  v         v       v       v                  v             NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<-~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGA*[12]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                   :GG:+G::GGG:AG:G:G GC :::::A A       :::::GC C:C:CU:CCC::CC:CC: C   ++C+   +
     chr6 441394 AAAGGGGGAAGGGGAGAGCGUGCGGGACAACA*[39]*AUGUCCGCUCGCUCUCCCCUUCCCCCUCCCCGCUCCGCUA 441284
                 *************************9999855...9..59999*********************************** PP

>>

RNAfold
>chr6_11
AGCGGAGCGGGGAGGGGGAAGGGGAGAGCGAGCGGACAUAUGGCGCGCGC
CUCCUCUGUGUGUGGUGUUUAGCCUCCGUGUUGUCCCGCACGCUCUCCCC
UUCCCCCUUU
...........(((((((((((((((((((.((((((((((((.(((((((.((.....).).)))))...))..))))).))).)))).))))))))))))))))))). (-66.10)

Length sequence

: 110

Length match:

109