chr6_14

cmsearch-Rfam

Family :

mir-506

Id:

RF01910

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01910

Description:

not description

Score:

29.6

E-value:

0.0038

From sequence:

100404

To sequence:

100321

Alignments:

                                                                          NC
                 <<<<-<<<--<<<<<-<<<<<<<<<~~~~~~>>>>>>>>>>>->>>-->>>->>>> CS
  RF01910      1 caauAGacACCCacCguGuCuuuuG*[37]*CaaaaGaCaGgAuGGuGguCCauug 87    
                 ::AU GAC  CCA:C U::C:U U        A A:G::AG:AUGGUGGUC AU::
     chr6 100404 UCAUUGACCACCAUCCUCGCCUUUU*[34]*AAGAGGCGAGGAUGGUGGUCAAUGA 100321
                 ***************9999999885...8..588999999**************** PP

RNAfold
>chr6_14
CUCAUUGACCACCAUCCUCGCCUCUUGCAGAUGCGCGCGCGCGGACAGGA
AGGCGAUCUAAAAAGGCGAGGAUGGUGGUCAAUGAGA
(((((((((((((((((((((((.((..((((.(((...(........)...))))))).)).))))))))))))))))))))))). (-55.60)

Length sequence

: 87

Length match:

82