chr6_15

cmsearch-Rfam

Family :

MIR529

Id:

RF00908

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00908

Description:

not description

Score:

40.2

E-value:

8.6e-07

From sequence:

244141

To sequence:

244209

Alignments:

                                                                                      NC
                 ::::<<--<--<<-<<<<<<<<<<<<<<-<~~~~~~>->>>>>>>>>>>>>>->>-->---->>:::: CS
  RF00908      1 acaUcaAGGCUaaAgGaaGaaGaGaGaGAG*[69]*CcCuCuCuCuuCuuCcCuuAGCUUCUugauug 131   
                   + ::AGGCU::A:GA:G:A::::G:GA         C:C::::U:C:UC: ::AGCUU  ::AUU 
     chr6 244141 GAGAGGAGGCUGGAAGAGGCAAGCGGGGAG*[ 7]*UUCCCCGCUUGCCUCUUCCAGCUUUCCUAUUC 244209
                 ****************************96...7..67****************************** PP

>>

RNAfold
>chr6_15
AGGUACCACAGUUGCCAAGACGGGGGAGGGGAGAGGAGGCUGGAAGAGGC
AAGCGGGGAGGACAGGCUUCCCCGCUUGCCUCUUCCAGCUUUCCUAUUCA
CCUAAGCAACACCCUUCGCCAGGCCUCUGC
........(((..(((..(.((((((((((((.((((((((((((((((((((((((((((.....))))))))))))))))))))))).))))).))).))).........)))))))..)))..))). (-76.70)

Length sequence

: 130

Length match:

67