chr6_16

cmsearch-Rfam

Family :

mir-577

Id:

RF01013

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01013

Description:

not description

Score:

37.5

E-value:

5.7e-05

From sequence:

244144

To sequence:

244215

Alignments:

                 v                                                          v            NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>::::::::::: CS
  RF01013      1 uGGGggaguGaaGaGcaGauaaaguau*[31]*auacuuuauCugCuCuuCacuccCCCaUAUcUAcUUAc 96    
                  G ::G:::GAAGAG:::A::::G:A        U:C::::U:::CUCUUC:::C:: C UAU  AC UA 
     chr6 244144 AGGAGGCUGGAAGAGGCAAGCGGGGAG*[ 7]*UUCCCCGCUUGCCUCUUCCAGCUUUCCUAUUCACCUAA 244215
                 *******************99999996...7..69999999****************************** PP

>>

RNAfold
>chr6_16
GGGGAGGGGAGAGGAGGCUGGAAGAGGCAAGCGGGGAGGACAGGCUUCCC
CGCUUGCCUCUUCCAGCUUUCCUAUUCACCUAAGCAACACCCUUC
((((((((((.((((((((((((((((((((((((((((.....))))))))))))))))))))))).))))).))).)))........)))).. (-65.10)

Length sequence

: 95

Length match:

70