chr6_17

cmsearch-Rfam

Family :

mir-577

Id:

RF01013

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01013

Description:

not description

Score:

36.6

E-value:

0.0001

From sequence:

441298

To sequence:

441402

Alignments:

                                  v              v                             NC
                 <<<<<<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>::::::::::: CS
  RF01013      1 uGGGggaguGaaGaGcaGauaa*[41]*uuauCugCuCuuCacuccCCCaUAUcUAcUUAc 96    
                 :GGGG:AG:G:AGAGC: ::::      :::: :GCUCU:C:CU:CCCC:U UCU  U AC
     chr6 441298 GGGGGAAGGGGAGAGCGAGCGG*[50]*CCGCACGCUCUCCCCUUCCCCCUUUCUUUUCAC 441402
                 ********************98...8..89******************************* PP

>>

RNAfold
>chr6_17
GGGGAAGGGGAGAGCGAGCGGACAUAUGGCGCGCGCCUCCUCUGUGUGUG
GUGUUUAGCCUCCGUGUUGUCCCGCACGCUCUCCCCUUCCCCCUUUCUUU
UCAC
((((((((((((((((.((((((((((((.(((((((.((.....).).)))))...))..))))).))).)))).))))))))))))))))............ (-59.30)

Length sequence

: 104

Length match:

103