chr6_18

cmsearch-Rfam

Family :

MIR815

Id:

RF00884

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00884

Description:

not description

Score:

33.0

E-value:

0.0013

From sequence:

334888

To sequence:

334823

Alignments:

                                v                             v                 NC
                 <<<<<<<<<<<<<<-<<--<<<<<<<<~~~~~~>>>>>>>>.-->>->>->>>>>>>>>>>> CS
  RF00884      1 cUucccAauCUcUcaAUUUCcUUcUCu*[26]*gGAgAAgG.GGAUUgAGgAGauUgggaAg 81    
                 :U:C:C:::C:CU:+ U UCC  CUC:      :GAG  GG GGA  :AGG:G:::G:G:A:
     chr6 334888 UUCCUCUCCCCCUUUGUCUCCUUCUCC*[10]*GGAGGGGGgGGAAGGAGGGGGGAGGGGAG 334823
                 ************999887777777766...8..77777666256889*************** PP

>>

RNAfold
>chr6_18
UGUGUAACUCCCCUCCCCCCUCCUUCCCCCCCCUCCUAGUGUGGGAGGAG
AAGGAGACAAAGGGGGAGAGGAAAAGAGCGU
.((.....(((.((((((((((((((.((.(((.........))).)).))))))).....))))))).))).....)).. (-38.00)

Length sequence

: 81

Length match:

64