chr6_6

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.2

E-value:

0.00031

From sequence:

380528

To sequence:

380658

Alignments:

                         v       v         v             v        v       v                    NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAG*[13]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UGGGG:+G :GGG::G :GGG:: :: GG G      CCC ::::CCC: C::CCC: CC:CCCC     CC   A+
     chr6 380528 UGGGGAGGAGGGGAGGAGGGGAGGGGUGGGG*[60]*CCCUCCCUCCCUCCCUCCCUCCCUCCCCGCCCACCGUUAC 380658
                 ******8888888877777777777777766...9..67777777777777889999999***************** PP

>>

RNAfold
>chr6_6
GGGGAGGAGGGGAGGAGGGGAGGGGUGGGGGUGCCGGCUGUCUGCUUUUC
CCGGGGUGUAGUGCUGCAUCUGAGCGCAUCAUAACCCCCUCCCUCCCUCC
CUCCCUCCCUCCCUCCCCGCCCACCGUUAC
(((((((.(((((((.(((((((((.(((((....(((.....)))......(((((...((((.((......))))))....))))))))))))))))))).))))))).)))))))............ (-73.90)

Length sequence

: 130

Length match:

129