chr6_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.6

E-value:

0.00044

From sequence:

380647

To sequence:

380520

Alignments:

                          v               v v             v v              v                     NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<--~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAA*[11]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG:+G: GGG::G::GGG:: : G GAG        CC C :::CCC::C::CCC :CC:CCCC      CA A +
     chr6 380647 CGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG*[58]*CCACCCCUCCCCUCCUCCCCUCCUCCCCACA---CACACA 380520
                 ********************8887777777765...9..4444556779999************999865...567889 PP

>>

RNAfold
>chr6_7
GUGUGUGUGGGGAGGAGGGGAGGAGGGGAGGGGUGGGGGUGCCGGCUGUC
UGCUUUUCCCGGGGUGUAGUGCUGCAUCUGAGCGCAUCAUAACCCCCUCC
CUCCCUCCCUCCCUCCCUCCCUCCCCG
.......((((((((.(((((((.(((((((((.(((((....(((.....)))......(((((...((((.((......))))))....))))))))))))))))))).))))))).)))))))) (-73.90)

Length sequence

: 127

Length match:

126