chr8_11

cmsearch-Rfam

Family :

mir-598

Id:

RF01059

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01059

Description:

not description

Score:

35.0

E-value:

0.0023

From sequence:

90584

To sequence:

90667

Alignments:

                               v              v v    vv  v      v  vv    v v              v            NC
                :::::::::::::<-<<<<<-<<<<<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>->>>>>-..>::::::: CS
  RF01059     1 uaaUGAUGAUgaUGaUGAUGaUGauGaUGaugauGAugauGa*[19]*uCaucaUCaucauCAuCauCAUCAUCAU..CAUcaaaa 97   
                 + UG  GAUGAUG  GAUG UG:UG::G: G :G :  UG        CA  : C: C :C::CA:CAUCAUC U  CA CA+++
     chr8 90584 CGGUGGCGAUGAUGGCGAUGGUGGUGGUGGUGGCGUCUUUGC*[ 4]*ACACUGGCGGCUCCGCCAUCAUCAUCUUuuCACCAUUU 90667
                ***********************************9988886...5..6888899*******************9888******** PP

>>

RNAfold
>chr8_11
UUUCUUCGGUGGCGAUGAUGGCGAUGGUGGUGGUGGUGGCGUCUUUGCUU
CUACACUGGCGGCUCCGCCAUCAUCAUCUUUUCACCAUUUUUUCCCU
.......((.((.((.(((((.((.((((((((((((((.(((...(((........)))))).))))))))))))))...)).))))).)).)))) (-37.80)

Length sequence

: 97

Length match:

82