gi_545778205_gb_U000_533

cmsearch-Rfam

Family :

rsmX

Id:

RF02144

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

22.6

E-value:

0.0055

From sequence:

20832

To sequence:

20765

Alignments:

                                      v              v                                               NC
                             :::::<<<<<<<<<_____.>>>>>>>>>~~~~~~~~~~~~,,,,,,,<<<<<<<<____>>>>>>>>::: CS
               RF02144     1 AacAACcggaGcgcAGGAa.gcgCuccgG*[14]**[42]*uUggaAAaaaCCCGCUUcGGCGGGuuuUUU 114  
                             A+CAAC::: ::GC   A  GC:: :::G            U  GAAAAA CCCGC  + GCGGG UUUUU
  gi_545778205_gb_U000 20832 AUCAACAAACUGGCUUAAUcGCCAAUUUG*[ 5]**[ 4]*UGUGAAAAAGCCCGCGCAAGCGGGUUUUUU 20765
                             **************876634*********...8.....8..78899999********************** PP

>>

RNAfold

>gi_545778205_gb_U000_533
CAUCACAAAAGCAGCAGGCAUAAAAAAACCCGCUUGCGCGGGCUUUUUCA
CAAAGCUUCAGCAAAUUGGCGAUUAAGCCAGUUUGUUGAUCUGUGCAGUC
AGGUUAGCCUUAU
...((((...((.((((((............)))))))).((((((.....))))))(((((((((((((......)))))))))))))..))))..((.(((....))).)) (-31.20)

Length sequence:

113

Length match:

66