gi_545778205_gb_U000_531

cmsearch-Rfam

Family :

rsmX

Id:

RF02144

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

23.0

E-value:

0.0042

From sequence:

3811269

To sequence:

3811205

Alignments:

                                        v   v     v   v                                               NC
                               :::::<<<<<<<<<_____>>>>>>>>>~~~~~~~~~~~~,,,,,,,<<<<<<<<____>>>>>>>>::: CS
               RF02144       1 AacAACcggaGcgcAGGAagcgCuccgG*[14]**[42]*uUggaAAaaaCCCGCUUcGGCGGGuuuUUU 114    
                               AA AA:CG: ::: A     ::: :CG:            +  +AAAAA:C CGCU CGGCG G:UUUUU
  gi_545778205_gb_U000 3811269 AAGAAGCGAAAAUCAAAU-AAUUCUCGC*[ 3]**[ 5]*AACAAAAAACCUCGCUCCGGCGGGGUUUUU 3811205
                               ************998876.9********...5.....5..4555558*********************** PP

>>

RNAfold

>gi_545778205_gb_U000_531
CAAUAUGGGGGCAAGCAGAUAACAAAAAACCCCGCCGGAGCGAGGUUUUU
UGUUACAUCAAAGCGAGAAUUAUUUGAUUUUCGCUUCUUUGUAGAUCACG
UGCUGGCGAACAAC
((...))(..((.((((....((((((((((.(((....))).))))))))))((((...(((((((((((....)))))))))))...)))).......)))).))......) (-30.50)

Length sequence:

114

Length match:

63