gi_545778205_gb_U000_544

cmsearch-Rfam

Family :

Betaproteobacteria_toxic_sRNA

Id:

RF02278

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

26.0

E-value:

0.0011

From sequence:

333

To sequence:

272

Alignments:

                                   vvv  v         v  vvv                                     NC
                           :::::::<<<<<<<<_______>>>>>>>>---.<<<<<<<<________>>>>>>>>::::::: CS
               RF02278   1 UGUCUCCUCCACccCUCCUCuuGggGUGGAUUc.agCCCgggccacAaggcccGGGcuUUUUUUu 64 
                           UGU  CCU   C:   CCU U   :G+++A  + AGCCCG::C    AGG::CGGGCUUUUUU U
  gi_545778205_gb_U000 333 UGUUACCU---CGUUACCUUUGGUCGAAAAAAAaAGCCCGCACUGUCAGGUGCGGGCUUUUUUCU 272
                           *******8...77777777777777766666556******************************* PP

>>

RNAfold

>gi_545778205_gb_U000_544
AGAAAAAAGCCCGCACCUGACAGUGCGGGCUUUUUUUUUCGACCAAAGGU
AACGAGGUAACAA
((((((((((((((((......))))))))))))))))(..(((...(....)..)))....) (-22.20)

Length sequence:

63

Length match:

60