gi_545778205_gb_U000_494

cmsearch-Rfam

Family :

STnc370

Id:

RF02064

Type:

Gene; sRNA;

Dominio:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

28.2

E-value:

0.0064

From sequence:

710115

To sequence:

710191

Alignments:

                                 v                   v                                                   NC
                              :::<<<<<<____~~~~~>>>>>>----------..-----<<<<<<<<<<______>>>>>>>>>>::::::: CS
               RF02064      1 AAUuAuuagCGAA*[4]*cuaaUacUAUUUaaGu..uAUAAAAAAACCUGCCCGAAAGCAGGUUUUUuUUUAuU 71    
                              AA   : AGC  +     CU :   UAUUU   U  +AUAAAAAA:CC::CCCG A+G::GG:UUUU U   U 
  gi_545778205_gb_U000 710115 AAGUGAGAGCUGU*[8]*CUUUUCUUAUUUCCCUugCAUAAAAAAGCCAACCCGCAGGUUGGCUUUUCUCGUUC 710191
                              *********9765..6..6667777777776544227************************************* PP

>>

RNAfold

>gi_545778205_gb_U000_494
AGUGAGAGCUGUAACUCUCGCUUUUCUUAUUUCCCUUGCAUAAAAAAGCC
AACCCGCAGGUUGGCUUUUCUCGUUC
((((((((......))))))))...............((....(((((((((((....)))))))))))...)).. (-18.30)

Length sequence:

76

Length match:

75