gi_545778205_gb_U000_543

cmsearch-Rfam

Family :

asX2

Id:

RF02236

Type:

Gene; sRNA;

Dominio:

Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;

Ontology:

Not found

Description:

not description

Score:

26.2

E-value:

0.0081

From sequence:

2530141

To sequence:

2530217

Alignments:

                                                                                                       NC
                               ::::::::::::.::<<<-<----<<-~~~~~~>>--->->>>--------<<<<<<<_____>>>>>>>: CS
               RF02236       1 UCGAAgGUuguU.GGGuGucCuuuGca*[23]*gCCAAgCCgCAAcAAAAAaGCCCCGACAaGCGGGGCuU 87     
                               UCG AG U+  U  G::GU:    G:       :CC  : C::  C AAAAA:CCCCGACAAGCGGGG:UU
  gi_545778205_gb_U000 2530141 UCGCAGUUCUGUcAGUUGUU----GUU*[18]*ACC--AUCAAUGCUAAAAACCCCCGACAAGCGGGGGUU 2530217
                               *****988765515666654....443...4..444..5677788899*********************** PP

>>

RNAfold

>gi_545778205_gb_U000_543
UCGUUCGCAGUUCUGUCAGUUGUUGUUCGAUUGAUUCCAUAUCGCACCAU
CAAUGCUAAAAACCCCCGACAAGCGGGGGUUCGAAG
...((((.......((((((((.....))))))))........(((.......)))....((((((((.....)))))))))))). (-18.40)

Length sequence:

86

Length match:

75