gi_545778205_gb_U000_508 |
cmsearch-Rfam |
Family : STnc100 |
Id: RF02076 |
Type: Gene; |
Dominio: Eukaryota; Bacteria; Viruses; | Ontology: Not found |
 |
Description: not description |
Score: 18.9 |
E-value: 0.01 |
From sequence: 1286475 |
To sequence: 1286576 |
Alignments: v v v v NC :::::::::::::(((--------~~~~~~~)))-------<<<<-----<<<<<<<<<______>>>>>>>>>----->> CS RF02076 1 uCaGauaGAauAUguGUUAaAAaA*[130]*CacAaAauaggcauaaauCaAaGCCCCuCUcCGgaGGGGCuUuUUUauau 204 C G+U GA+UAU :G A AA C: A +U +G :A A A :CCC :CU+CGG: GGG: U UUUAU: gi_545778205_gb_U000 1286475 ACCGGUGGAGUAUCUGACACGUAA*[ 29]*CGAA-UUUUAGUUCACA--UAGACCCUGCUUCGGCGGGGUUUUUUUAUGG 1286574 *************99876666555....7..3333.233446666554..6789*************************** PP
NC >> CS RF02076 205 gc 206 C gi_545778205_gb_U000 1286575 GC 1286576 ** PP
>> |
RNAfold |
>gi_545778205_gb_U000_508 GACGUUAUUCCUGCUGUUCCCGUUCUCGCGUCUGAUACACAUCUGGAGCG UACCGGUGGAGUAUCUGACACGUAAGUACCAGCUGGUGCGCGCUCGUCAC UAAGCGAAUUUUAGUUCACAUAGACCCUGCUUCGGCGGGGUUUUUUUAUG GGCACGGUGCGGGGUGAGUUGUCGGAUGCGCUUCGCUUAUCCGACCUACA GGGGA (((.(((((((((((((.(((((...((.(((.(((((.((.((((......))))))..))))).))).))...(((((....))))).((((........))))...............(((((((((....)))))))))....))))).)))))).))))))))))((((((((.((...)).)))))))).......... (-68.90) |
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Length sequence: 205 |
Length match: 100 |