gi_545778205_gb_U000_542

cmsearch-Rfam

Family :

sX9

Id:

RF02228

Type:

Gene; sRNA;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

28.0

E-value:

0.0024

From sequence:

2543724

To sequence:

2543658

Alignments:

                                                                                      NC
                               :<<<<<_____>>>>>,,,<<<<-<____>->>>>,,,,,,,,,,,~~~~~~:: CS
               RF02228       1 AUGuaCcACuCGuaCAcUccGGuUCCugcGCgCCguCCGcaCCCAc*[28]*CC 76     
                               A:GUAC+A   GUAC:CUCC GUU CU+C CGC GU CG   CCA       CC
  gi_545778205_gb_U000 2543724 ACGUACUAUGUGUACGCUCCGGUUUCUCCGCGCUGUUCGUGUCCAA*[19]*CC 2543658
                               ****************************************999885...5..** PP

>>

RNAfold

>gi_545778205_gb_U000_542
AACAGGCGUAAUUGUUGCAGUCAGUUUGGACACGAACAGCGCGGAGAAAC
CGGAGCGUACACAUAGUACGUGAGGA
.....((((...((((...(((......)))...)))))))).......((...((((((.....))))))..)). (-14.40)

Length sequence:

76

Length match:

65