Infernal | RNAfold | |||||||
Sequence |
RNA family |
Id |
From_seq |
To_seq |
Score |
Evalue |
Score |
Struct |
Intron |
---|---|---|---|---|---|---|---|---|
gi_545778205_gb_U000_71 | group-II-D1D4-4 | RF02003 | 4501332 | 4501193 | 67.8 | 9e-14 | -42.40 | ![]() |
gi_545778205_gb_U000_72 | group-II-D1D4-6 | RF02005 | 4501323 | 4501067 | 19.9 | 0.0017 | -84.10 | ![]() | IRES |
gi_545778205_gb_U000_77 | IRES_Bip | RF00223 | 1472215 | 1472295 | 23.6 | 9.6e-05 | -81.20 | ![]() |
gi_545778205_gb_U000_78 | IRES_c-myc | RF00216 | 655274 | 655419 | 30.3 | 2.8e-06 | -88.60 | ![]() | Others-cis |
gi_545778205_gb_U000_140 | mini-ykkC | RF01068 | 4376811 | 4376857 | 50.3 | 2.5e-08 | -16.60 | ![]() |
gi_545778205_gb_U000_154 | nuoG | RF01748 | 2400215 | 2400173 | 45.5 | 7.8e-08 | -9.30 | ![]() |
gi_545778205_gb_U000_234 | SECIS_2 | RF01988 | 1547981 | 1548035 | 28.8 | 0.0025 | -14.20 | ![]() |
gi_545778205_gb_U000_235 | SECIS_2 | RF01988 | 4085242 | 4085188 | 28.1 | 0.0038 | -16.00 | ![]() |
gi_545778205_gb_U000_236 | SECIS_2 | RF01988 | 4298954 | 4298900 | 87.1 | 3.1e-19 | -16.60 | ![]() |
gi_545778205_gb_U000_237 | SECIS_3 | RF01989 | 1547983 | 1548041 | 84.3 | 2.4e-20 | -15.40 | ![]() |
gi_545778205_gb_U000_238 | SECIS_3 | RF01989 | 4085240 | 4085182 | 84.3 | 2.4e-20 | -17.30 | ![]() |
gi_545778205_gb_U000_239 | SECIS_3 | RF01989 | 4298952 | 4298894 | 35.8 | 3.9e-06 | -16.60 | ![]() |
gi_545778205_gb_U000_33 | ClpQY_promoter | RF02401 | 4122342 | 4122285 | 62.5 | 5.6e-12 | -17.40 | ![]() |
gi_545778205_gb_U000_485 | TwoAYGGAY | RF01731 | 2229367 | 2229228 | 33.2 | 0.0043 | -71.20 | ![]() |
gi_545778205_gb_U000_486 | TwoAYGGAY | RF01731 | 915036 | 915175 | 34.9 | 0.0018 | -85.60 | ![]() |
gi_545778205_gb_U000_88 | iscRS | RF01517 | 2661642 | 2661533 | 138.0 | 1.1e-37 | -28.80 | ![]() |
gi_545778205_gb_U000_96 | JUMPstart | RF01707 | 2113175 | 2113137 | 60.0 | 4.5e-13 | -5.10 | ![]() |
gi_545778205_gb_U000_97 | JUMPstart | RF01707 | 2137460 | 2137422 | 57.3 | 2.8e-12 | -4.70 | ![]() |
gi_545778205_gb_U000_98 | JUMPstart | RF01707 | 3808220 | 3808182 | 55.2 | 1.1e-11 | -3.10 | ![]() |
gi_545778205_gb_U000_17 | Alpha_RBS | RF00140 | 3442550 | 3442439 | 104.1 | 7e-25 | -26.00 | ![]() |
gi_545778205_gb_U000_206 | RtT | RF00391 | 1097158 | 1097022 | 35.8 | 3e-05 | -60.80 | ![]() |
gi_545778205_gb_U000_207 | RtT | RF00391 | 1097339 | 1097203 | 45.8 | 7.8e-08 | -59.30 | ![]() |
gi_545778205_gb_U000_208 | RtT | RF00391 | 1097520 | 1097384 | 45.8 | 7.8e-08 | -59.30 | ![]() |
gi_545778205_gb_U000_209 | RtT | RF00391 | 1286841 | 1286710 | 132.1 | 5.1e-30 | -47.60 | ![]() |
gi_545778205_gb_U000_210 | RtT | RF00391 | 1287019 | 1286888 | 131.9 | 5.6e-30 | -50.40 | ![]() |
gi_545778205_gb_U000_211 | RtT | RF00391 | 1287197 | 1287066 | 135.3 | 7.4e-31 | -54.80 | ![]() |
gi_545778205_gb_U000_212 | RtT | RF00391 | 1287494 | 1287363 | 131.2 | 8.6e-30 | -42.40 | ![]() |
gi_545778205_gb_U000_213 | RtT | RF00391 | 2521359 | 2521484 | 49.3 | 1e-08 | -46.30 | ![]() |
gi_545778205_gb_U000_214 | RtT | RF00391 | 2818051 | 2817924 | 32.2 | 0.00026 | -40.00 | ![]() |
gi_545778205_gb_U000_215 | RtT | RF00391 | 2818449 | 2818339 | 30.6 | 0.00063 | -49.10 | ![]() |
gi_545778205_gb_U000_216 | RtT | RF00391 | 3708581 | 3708448 | 105.7 | 3.1e-23 | -49.50 | ![]() |
gi_545778205_gb_U000_217 | RtT | RF00391 | 780561 | 780729 | 63.0 | 3e-12 | -55.00 | ![]() |
gi_545778205_gb_U000_218 | RtT | RF00391 | 780850 | 781016 | 58.5 | 4.3e-11 | -58.50 | ![]() |
gi_545778205_gb_U000_219 | RtT | RF00391 | 781154 | 781320 | 58.0 | 5.7e-11 | -53.70 | ![]() |
gi_545778205_gb_U000_220 | RtT | RF00391 | 781376 | 781543 | 64.0 | 1.6e-12 | -55.80 | ![]() |
gi_545778205_gb_U000_221 | RtT | RF00391 | 781683 | 781808 | 48.8 | 1.4e-08 | -46.30 | ![]() |
gi_545778205_gb_U000_194 | rncO | RF00552 | 2704223 | 2704009 | 256.9 | 3.3e-62 | -68.20 | ![]() |
gi_545778205_gb_U000_195 | rncO | RF00552 | 2704095 | 2704192 | 23.9 | 0.0073 | -65.20 | ![]() |
gi_545778205_gb_U000_196 | rne5 | RF00040 | 1144728 | 1144392 | 248.8 | 1.1e-77 | -104.70 | ![]() |
gi_545778205_gb_U000_487 | yybP-ykoY | RF00080 | 1905456 | 1905557 | 41.3 | 4e-09 | -51.50 | ![]() |
gi_545778205_gb_U000_75 | Histone3 | RF00032 | 2775049 | 2775005 | 23.6 | 0.00062 | -11.10 | ![]() | frameshift |
gi_545778205_gb_U000_57 | DnaX | RF00382 | 493356 | 493420 | 96.8 | 1e-21 | -21.60 | ![]() | leader |
gi_545778205_gb_U000_483 | Trp_leader | RF00513 | 1323061 | 1322968 | 90.4 | 9.1e-20 | -29.60 | ![]() |
gi_545778205_gb_U000_484 | Trp_leader | RF00513 | 2620264 | 2620201 | 27.3 | 0.0041 | -21.40 | ![]() |
gi_545778205_gb_U000_73 | His_leader | RF00514 | 2090022 | 2090145 | 131.6 | 7.4e-24 | -59.60 | ![]() |
gi_545778205_gb_U000_74 | His_leader | RF00514 | 2090146 | 2090106 | 31.5 | 0.0045 | -53.80 | ![]() |
gi_545778205_gb_U000_100 | Leu_leader | RF00512 | 1019017 | 1018969 | 27.2 | 0.0032 | -48.80 | ![]() |
gi_545778205_gb_U000_101 | Leu_leader | RF00512 | 1256548 | 1256667 | 33.1 | 9.4e-05 | -38.20 | ![]() |
gi_545778205_gb_U000_102 | Leu_leader | RF00512 | 1256706 | 1256636 | 31.0 | 0.00032 | -32.50 | ![]() |
gi_545778205_gb_U000_103 | Leu_leader | RF00512 | 2418515 | 2418633 | 26.6 | 0.0045 | -48.70 | ![]() |
gi_545778205_gb_U000_104 | Leu_leader | RF00512 | 2653330 | 2653385 | 26.0 | 0.0064 | -57.60 | ![]() |
gi_545778205_gb_U000_105 | Leu_leader | RF00512 | 2976396 | 2976305 | 28.1 | 0.0019 | -34.30 | ![]() |
gi_545778205_gb_U000_106 | Leu_leader | RF00512 | 3811269 | 3811202 | 29.3 | 0.0009 | -43.40 | ![]() |
gi_545778205_gb_U000_107 | Leu_leader | RF00512 | 4044013 | 4044090 | 33.2 | 8.7e-05 | -36.60 | ![]() |
gi_545778205_gb_U000_108 | Leu_leader | RF00512 | 4044210 | 4044059 | 26.6 | 0.0044 | -40.60 | ![]() |
gi_545778205_gb_U000_109 | Leu_leader | RF00512 | 657480 | 657548 | 26.5 | 0.0049 | -42.40 | ![]() |
gi_545778205_gb_U000_110 | Leu_leader | RF00512 | 659269 | 659190 | 26.5 | 0.0048 | -46.40 | ![]() |
gi_545778205_gb_U000_111 | Leu_leader | RF00512 | 83550 | 83604 | 33.8 | 6.3e-05 | -48.90 | ![]() |
gi_545778205_gb_U000_112 | Leu_leader | RF00512 | 83722 | 83573 | 145.2 | 9e-34 | -51.50 | ![]() |
gi_545778205_gb_U000_347 | Thr_leader | RF00506 | 191 | 310 | 122.9 | 4.4e-25 | -46.60 | ![]() |
gi_545778205_gb_U000_348 | Thr_leader | RF00506 | 2700538 | 2700595 | 28.9 | 0.0046 | -38.40 | ![]() |