gi_545778205_gb_U000_517 |
cmsearch-Rfam |
Family : STnc130 |
Id: RF02084 |
Type: Gene; |
Dominio: Eukaryota; Bacteria; | Ontology: Not found |
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Description: not description |
Score: 122.8 |
E-value: 1.8e-24 |
From sequence: 940868 |
To sequence: 940734 |
Alignments: v v NC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::<<______>>------------- CS RF02084 1 UAUAucGAAaaaauuaAaaAuuAGcguuAuAugCUGAuUUUCAuuCgAAGGcAGUAUUACuccuAuaGgaGaAGggAUUAUUG 83 UA AUCGAA+AA UU AAAAU+A +G+ AUA G GAUUUUCA UCGAA G+AGUAUUAC : UA+ : G AG++AUUAUUG gi_545778205_gb_U000 940868 UACAUCGAAUAAUUUGAAAAUCAAAGAGAUAGGUAGAUUUUCACUCGAAAGUAGUAUUACGUGUAAGUGAGGAGUAAUUAUUG 940786 *********************************************************************************** PP
NC -----------------------<<<<<<<<____>>>>>>>>::::::::: CS RF02084 84 ucCGGUAUCAAAagGGCAUAAAAAAAGCGCCCGcAGGCGCUUUUUAaauaAg 135 U+CGGUAUCAAA GG A AAAAAAAGCGCCCGCAGGCGCUUUUUA+AU+ gi_545778205_gb_U000 940785 UUCGGUAUCAAAGGGAGACAAAAAAAGCGCCCGCAGGCGCUUUUUAGAUUCA 940734 **************************************************** PP
>> |
RNAfold |
>gi_545778205_gb_U000_517 GAAUCUAAAAAGCGCCUGCGGGCGCUUUUUUUGUCUCCCUUUGAUACCGA ACAAUAAUUACUCCUCACUUACACGUAAUACUACUUUCGAGUGAAAAUCU ACCUAUCUCUUUGAUUUUCAAAUUAUUCGAUGUA (.....((((((((((....)))))))))).((((.......))))..........(((((.............))))).)(((..(((((((((((((.............)))))))).....))))).))) (-25.10) |
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Length sequence: 134 |
Length match: 133 |