gi_545778205_gb_U000_547

cmsearch-Rfam

Family :

Betaproteobacteria_toxic_sRNA

Id:

RF02278

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

24.0

E-value:

0.0038

From sequence:

2025276

To sequence:

2025222

Alignments:

                                      v      v       v      v                                    NC
                               :::::::<<<<<<<<_______>>>>>>>>---<<<<<<<<____.____>>>>>>>>::::::: CS
               RF02278       1 UGUCUCCUCCACccCUCCUCuuGggGUGGAUUcagCCCgggccac.AaggcccGGGcuUUUUUUu 64     
                               UG      C: :C:       U+:G: :G UUCA:CCCG::CC C  AGG::CGGG:UUUUUUU 
  gi_545778205_gb_U000 2025276 UGCU---UCUUGCU-------UAAGCAAGUUUCAUCCCGACCCCCuCAGGGUCGGGAUUUUUUUA 2025222
                               **55...5555655.......256666666888**********9988999*************** PP

>>

RNAfold

>gi_545778205_gb_U000_547
ACAAUAAAAAAAUCCCGACCCUGAGGGGGUCGGGAUGAAACUUGCUUAAG
CAAGAAGCACUUAA
...........(((((((((((...)))))))))))....(((((....))))).......... (-17.60)

Length sequence:

64

Length match:

53