gi_545778205_gb_U000_490

cmsearch-Rfam

Family :

STnc370

Id:

RF02064

Type:

Gene; sRNA;

Dominio:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

30.4

E-value:

0.0018

From sequence:

2906657

To sequence:

2906590

Alignments:

                                    v              v                                                   NC
                               :::<<<<<<________>>>>>>---------------<<<<<<<<<<______>>>>>>>>>>::::::: CS
               RF02064       1 AAUuAuuagCGAAUcaucuaaUacUAUUUaaGuuAUAAAAAAACCUGCCCGAAAGCAGGUUUUUuUUUAuU 71     
                               AA  : :AG  A+ + +CU: :  UAU U  G U UAAAAA :CC:GCC    +GC:GG: UUU UUUAU 
  gi_545778205_gb_U000 2906657 AAAGGCCAGGCAUAAGACUGACUUUAUCU--GAUUUAAAAAUGCCAGCCUCCGGGCUGGCAUUU-UUUAUG 2906590
                               *********************99999765..667789************99999**********.9***** PP

>>

RNAfold

>gi_545778205_gb_U000_490
CCAUAAAAAAUGCCAGCCCGGAGGCUGGCAUUUUUAAAUCAGAUAAAGUC
AGUCUUAUGCCUGGCCUUUGA
.....(((((((((((((....)))))))))))))...(((((....(((((.(....).))))).))))) (-21.00)

Length sequence:

71

Length match:

66