gi_545778205_gb_U000_545

cmsearch-Rfam

Family :

Betaproteobacteria_toxic_sRNA

Id:

RF02278

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

24.3

E-value:

0.0032

From sequence:

83542

To sequence:

83606

Alignments:

                                                                                 NC
                             :::::::<<~~~~~~>>---<<<<<<<<________>>>>>>>>::::::: CS
               RF02278     1 UGUCUCCUC*[19]*GAUUcagCCCgggccacAaggcccGGGcuUUUUUUu 64   
                             UGUCUC U:      :A  +A:CCCG:GC A   GGC:CGGG:UUUUU UU
  gi_545778205_gb_U000 83542 UGUCUCUUU*[22]*AAAAAAACCCGCGCAAU--GGCGCGGGUUUUUUGUU 83606
                             ********7...7..35567********9966..99*************** PP

>>

RNAfold

>gi_545778205_gb_U000_545
GUCUCUUUUAGAGCGCCUCGCUUCGGGCAUAAAAAAACCCGCGCAAUGGC
GCGGGUUUUUUGUU
((((......(((((...))))).))))(..(((((((((((((....)))))))))))))..) (-25.60)

Length sequence:

64

Length match:

63