gi_545778205_gb_U000_548

cmsearch-Rfam

Family :

Betaproteobacteria_toxic_sRNA

Id:

RF02278

Type:

Gene;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

23.2

E-value:

0.0067

From sequence:

1972836

To sequence:

1972778

Alignments:

                                      vv     v       v     vv                                    NC
                               :::::::<<<<<<<<_______>>>>>>>>---<<<<<<<<____.____>>>>>>>>::::::: CS
               RF02278       1 UGUCUCCUCCACccCUCCUCuuGggGUGGAUUcagCCCgggccac.AaggcccGGGcuUUUUUUu 64     
                                 UCUCC  C ::  UCCUC+   :: G+A U A:CCCG::  +C   G ::CGGG:UUUUU UU
  gi_545778205_gb_U000 1972836 AUUCUCC--CGAU-UUCCUCA---AUUGAAAUGAACCCGAUGAUCuGCGCAUCGGGUUUUUUAUU 1972778
                               *******..4443.3888763...334455999********999978888*************** PP

>>

RNAfold

>gi_545778205_gb_U000_548
GAAAUAAAAAACCCGAUGCGCAGAUCAUCGGGUUCAUUUCAAUUGAGGAA
AUCGGGAGAAUUAC
((.......(((((((((.......)))))))))..((((......)))).))(.........) ( -7.80)

Length sequence:

64

Length match:

57