gi_545778205_gb_U000_501

cmsearch-Rfam

Family :

STnc240

Id:

RF02074

Type:

Gene; sRNA;

Dominio:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

59.9

E-value:

6.7e-10

From sequence:

2087283

To sequence:

2087209

Alignments:

                                                                        v                          v          NC
                               ::::::::::<<_______>>-----------------.--<<<<<<<<<__________>>>>>>>>>::::::::: CS
               RF02074       1 uuaAauUaGuGCAAAAUACGCcgCuUGcAAAAAAAgAa.AauAACCGACGaUUUuAAAaGCGUCGGUUaUUUUUUUgc 77     
                                + A+UUAG GCA AAU CGCCGCU  CAAAAAA+GA  AA AACCGACG+UU +  A GCGUCGGUU UUUUUU GC
  gi_545778205_gb_U000 2087283 CCCAUUUAG-GCACAAUGCGCCGCUGUCAAAAAAUGACuAAAAACCGACGUUUCAUCA-GCGUCGGUUAUUUUUU-GC 2087209
                               ********9.***************************99***********88876666.9********9887766.99 PP

>>

RNAfold

>gi_545778205_gb_U000_501
GCAAAAAAUAACCGACGCUGAUGAAACGUCGGUUUUUAGUCAUUUUUUGA
CAGCGGCGCAUUGUGCCUAAAUGGGG
((((.....((((((((.........))))))))....((((.....)))).........)))).(((....))). (-15.00)

Length sequence:

76

Length match:

73