gi_545778205_gb_U000_514

cmsearch-Rfam

Family :

STnc540

Id:

RF02082

Type:

Gene; sRNA;

Dominio:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

24.3

E-value:

0.003

From sequence:

1795203

To sequence:

1795240

Alignments:

                                                                      NC
                               -------------<<<<<<<<<<<___>>>>>>>>>>> CS
               RF02082     103 GACgCGUAUAACUaaaaaGGCCGCAuUGCGGCCuuuuu 140    
                               GAC    A AA  AAAAAGGCCGCA  GCGGCCUUUUU
  gi_545778205_gb_U000 1795203 GACAGUGAAAAGAAAAAAGGCCGCAGAGCGGCCUUUUU 1795240
                               ************************************** PP

>>

RNAfold

>gi_545778205_gb_U000_514
GUCGCUGUUGUUGGCGGGCAAGUGUCAGCAUGGUAUCCGUUCUGCUGAAG
UGUCAUGGCGUUGAUUUUACGGUGACUCUUCGACAGUGAAAAGAAAAAAG
GCCGCAGAGCGGCCUUUUUAGUUAGAUCAGAUUACUCGUCUUUGGGCGAA
GCGUUUUCGACCCGGCUUUUUAACUUCUGCCCGGGUCUGAAGGUCACCAC
G
(..(((((.(((((((......))))))))))))..)(((.(((.(((((.(((((..(((.......)))))))).))))).)))(((.((..(((((((((((...)))))))))))..))...)))......(((((....))))).((.(((..((((((((............).))))))).))).))....))) (-67.00)

Length sequence:

201

Length match:

36