gi_545778205_gb_U000_507 |
cmsearch-Rfam |
Family : STnc100 |
Id: RF02076 |
Type: Gene; |
Dominio: Eukaryota; Bacteria; Viruses; | Ontology: Not found |
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Description: not description |
Score: 20.1 |
E-value: 0.0044 |
From sequence: 2167328 |
To sequence: 2167259 |
Alignments: v v v v NC :::::::::::::((~~~~~~~))-------<<<<-----.<<<<<<<<<______>>>>>>>>>----->>>> CS RF02076 1 uCaGauaGAauAUgu*[140]*acAaAauaggcauaaauC.aAaGCCCCuCUcCGgaGGGGCuUuUUUauaugc 206 UCAG+ + +A :: ::A UA+ : :AAA AAGCCCCUC+ GAGGGGCUU UUU U: : gi_545778205_gb_U000 2167328 UCAGGGCAGCAAAUU*[ 4]*GGA-UGUAAUUAGAAACAgGAAGCCCCUCAGUCGAGGGGCUUUUUUGUCGAU 2167259 ***987777666654....5..233.223345566666658********************************* PP
>> |
RNAfold |
>gi_545778205_gb_U000_507 UUAUUUUUUACGCGUAAUACAAUGAAAUAAAAGGAUUUAUUUCUGGUCAC GUCCACACAUUGACCACAUCGACAAAAAAGCCCCUCGACUGAGGGGCUUC CUGUUUCUAAUUACAUCCACAUAAUUUGCUGCCCUGACGGCAACGGGUGC GGCCUUACGACGUGGACUUCUCCCGGCUUCACAAUGUAUCGCUGUACCGA CUCAU .......................((((((((....))))))))((((((.((....))..))))))....((((...(((((((((....)))))))))..))))....................((((((......))))))..((((((((..((((..(((((((......)).)))))..))))..))))))))....... (-49.50) |
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Length sequence: 205 |
Length match: 68 |