Alignments: NC
{{{{{{{{,,,,,,{{{{{{{{{{-----{{{,,{{{{{{{{{{{[[,,,,,((((<<<________>>>,,,,,<<<<<< CS
RF02541 1 ggucaagcuauuAAggGCgcgcGGuGGAUGCCUuGGcgccgggaggCGAuGAgGGaCGcGguaagCugCGAuAAGCcccGg 81
GGU:AAGC A UAA::G::C:CGGUGGAUGCC UGGC:::::GAGGCGAUGA:GGACG:G UAA CU:CGAUAAGC::CGG
gi_545778205_gb_U000 3426783 GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCGG 3426703
********************************************************************************* PP
NC
<--<<<_______>>>----.->>>>>>>,,,)))),,,<<<____>>><<<<<<<______>>>>>>>,<<<<<<<<<__ CS
RF02541 82 ggAGccGcaAacAggCuuuG.AccCgggGAUuuCCcAAUgGGGaAACCcgcccgggguaauacccgggcAcccccggccGA 161
: AG::G +A A::C UU A:CCG::GAUUUCC:AAUGGGGAAACCC:::::G: ++ :C:::::A:C:::::C:GA
gi_545778205_gb_U000 3426702 UAAGGUGAUAUGAACCGUUAuAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGU--UUCGACACACUAUCAUUAACUGA 3426624
****************88877***********************************..6778******************* PP
NC
_______>>>>>>>>>,]],,,<<<<<<-----<<____>>------>>>>>->,,,,,,,,,<<____>>,,{<<<<<-- CS
RF02541 162 AuacAUAggccgggggaGcaAACccgGgGAAcUGaAACAuCUaAGUAcCcggAGGAAAAGAAAgcAAaagcgAuuCCccuA 242
AU CAUA:G:::::G:+GC+AACC:GGGGAACUGAAACAUCUAAGUACCC:GAGGAAAAGAAA:CAA G:GAUUCCCC A
gi_545778205_gb_U000 3426623 AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCCA 3426543
********************************************************************************* PP
v NC
---<<_____>>---->>>>>,,[[[[,,,,<<<<<<<________>>>>>>>,,,,,,(((-(((((-------(((((( CS
RF02541 243 GUAGcGGCGAgCGAAaggGGaauaGcCcAAACcggggguuauuguucccccgGGGUugugGGacccccaaauuaagagccc 323
GUAGCGGCGAGCGAA+GGGGA AGCCCA :::C + +A+:AG: :
gi_545778205_gb_U000 3426542 GUAGCGGCGAGCGAACGGGGAGCAGCCCA----------------------------------GAGCCUG--AAUCAGUGU 3426498
***************************98..................................9999988..899****** PP
v NC
(((((((-(((,,,<<<<<______>>>>>,,<___>,<<<_______>>>,,,)))---)))))))))))))--)))))- CS
RF02541 324 cccggcuAgccGAAcggccUGGAAaggccgaCCauAGagGGUGAuAGuCCcGUAggcgaAagccggggggcucuugggggu 404
:::: :UAG::GAA::G:CUGGAAAG:C::+C:AUA:AGGGUGA AG+CCCGUA::C AAA: ::::: :CU:U G:::+
gi_545778205_gb_U000 3426497 GUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGAUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCG 3426417
***************************************************************************999999 PP
NC
--))),,,,,<<<<<<<<<_______>>>>>>>>>,,,,,,<<<<<______>>>>>,,]]]],,},,}}-}}}}}}}-}} CS
RF02541 405 auCCcgAGUAgggCggggcAcGuGaAgccccGcccGAAuaugggggGACCAccccccAAGgCuAAaUAcuccccggcgACC 485
AU GAGUA:G:C:GG::ACGUG ::CC:G:C:GAAUAUGG:GGGACCA+CC:CCAAGGCUAAAUACUCC:::::GACC
gi_545778205_gb_U000 3426416 AU---GAGUAGGGCGGGACACGUGGUAUCCUGUCUGAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACC 3426339
98...**************************************************************************** PP
NC
,,,,,,,,,,,,,,,<<____>>,,,,}},,,,,,,,,<<<<_____>>>>,,,,,,,,,,,,,}-----}}}}}}}}}}, CS
RF02541 486 GAUAGuGaAcuAGUACCGUGAGGGAAAGGUGAAAAGaACCCcggugAgGGGAGUGAAAuAGaaCCUGAAACCgcgcGCccA 566
GAUAGUGAAC AGUACCGUGAGGGAAAGG GAAAAGAACCCCGG+GAGGGGAGUGAAA AGAACCUGAAACCG:G::C::A
gi_545778205_gb_U000 3426338 GAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUA 3426258
********************************************************************************* PP
v v NC
,,,,{,<<<<<<<<<<<________>>>>>>>>>>>,,<<<<________>>>>{{{{{{,,,,(((((((((((((,,<< CS
RF02541 567 CAAgcaGucGcggcccgauuuuaaucgggccgCggCGUcCcUUUUGuAuAAgGggcCggCGAgUugccgcgcgcggCaAGg 647
CAAGCAGU G:::C:CG UUA+ CG:G:::C GCGU C:UUUUGUAUAA:G G:C:GCGA UU::: :::G::GCAAGG
gi_545778205_gb_U000 3426257 CAAGCAGUGGGAGCACG--CUUAGGCGUGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGG 3426179
*****************..667777******************************************************** PP
NC
<<--<<<_____>>>-->>>>,,,<<____>>,<<<<<_____>>>>>,,,,))))))))))))),,[[-[---[[[[[[, CS
RF02541 648 uUAAgccugauaggcGuAgcCGuAGcGAAAgCGcGuCcgAAuAgGgCgauuAGucgcgcgcggcaGACcCGAAACcggGuG 728
UUAA:C +AUA G:G+AGCCG+AG:GAAA:CG:GUC:+AA :GGC:+U+AGU::C::: :::AGACCCGAAACC:GGUG
gi_545778205_gb_U000 3426178 UUAACC-GAAUA-GGGGAGCCGAAGGGAAACCGAGUCUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUG 3426100
*****9.67777.99****************************************************************** PP
NC
,,((((((((((((,<<<<---<<<<<<<____>>>>>>>---->>>>,,,<<<-<<<<<________>>>>>>>>,,)-) CS
RF02541 729 AuCuaccCauggcCAGGguGAAgccgggcUAAagcccgguGGAGgcCCGAACccacgcccGUUGAAAAgggcgggGAUGAg 809
AUC A:CCAUG :CAGG:UGAAG::: G:UAA+:C :::UGGAGG:CCGAACC:AC::::GUUGAAAA::::G:GGAUGA:
gi_545778205_gb_U000 3426099 AUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACUAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGAC 3426019
********************************************************************************* PP
NC
)))))))))),<<<_____>>>,,,,,,]]]]]]------]-]],,[[[[[[,,,,<<<<<____>>>>>,<<<<<<<<-- CS
RF02541 810 cuguGgguaGgGGcGAAAggCCAAUCaAaCccgGaGAUAGCUgGUUCUCccCGAAAugccuUuAGgggcaGCgucgggcga 890
UGUGG:U GGGG:GAAAG:CCAAUCAAACC:GGAGAUAGCUGGUUCUCCCCGAAA::::UUUAGG::::GC:UCG:G:++
gi_545778205_gb_U000 3426018 UUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAU 3425938
********************************************************************************* PP
v v NC
<<<<<<<<<<<----<<<---<<<-<<<<---<<<<<<<____.>>>>>->>--->>>>->>>-->>->---->>>>>>>. CS
RF02541 891 ucccccccggcGGUAgaGCACuggaugggcuAgGgggccuaaa.ggccuACcaAacccaaccaAACuccGAAUgccgggg. 969
UC::C:CCGG GGUAGAGCACUG +U:GGC+AGGG:G:C + + G:C:UACCAA CC:A CAAACU CGAAU CCGG:G
gi_545778205_gb_U000 3425937 UCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAGGGGGUCAUCCcGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGa 3425857
***************************************99989************************************9 PP
NC
>>>-->>>>>>>>->,,,<<<<<<<<<<______>>>>>>>>>>,,,,<<<______>>>,,,((((-(((---(((---- CS
RF02541 970 gggaaagcccggcAGucAgaccgcgggcGaUAAgguccgcggucgAgAGGGaAAcAaCCCAGAcCgcCagcUAAGGuCCCu 1050
::G++A:C:CGG:AG+CA:AC::CGGG:G+UAA :UCCG::GU:+AGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCC+
gi_545778205_gb_U000 3425856 AUGUUAUCACGGGAGACACACGGCGGGUGCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCA 3425776
9******************************************************************************** PP
vv NC
--(-((((((-----------(((-((((((((((-------(((((,<<<--<<<_________>>>-->>><___><-- CS
RF02541 1051 AAgugcggGcUAAGUGggAAAGGcuGuggggccgCuaAgACAaCcaGGAgGUUGGCUUAGAAGCAGCCAUCcUuuAAaGAg 1131
AAGU:::GG:UAAGUGGGAAA:G:UGU:GG ::C AGACA:CCAGGA:GUUGGCUUAGAAGCAGCCAUC:UUUAAAGA+
gi_545778205_gb_U000 3425775 AAGUCAUGGUUAAGUGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAA 3425695
********************************************************************************* PP
vv NC
-<<______>>->,)))))---)))))))))))))--------------------))))))))))---)))))))<<<<<< CS
RF02541 1132 uGCGUAAuAGCUCACugGuCaAGcggccccgCgCCGAaAAUguaaCGGGGCUcAAgCccgccaCCGAAgcugcGggcucgc 1212
+GCGUAAUAGCUCACUGG:C+AG:: CC:GC:C:GAA AUGUAACGGGGCU AA:CC:::CACCGAAGCUGCGG:: C :
gi_545778205_gb_U000 3425694 AGCGUAAUAGCUCACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCU-AAACCAUGCACCGAAGCUGCGGCAGCGA 3425615
****************************************************.**************************** PP
vv vv NC
<<._____>>>>>>>>,,,,]]]]]]<-<<<<<<<.<<<------<<<<<<<<____>>>>>>>>--->>>>>>>>>>--> CS
RF02541 1213 gg.uuuaaccgcgagcGGUAGggGAGCguuccgcc.cgcgguGAAggcgccccGuaAggggcgccGGAgcgggcggaaGuG 1291
:G UU++ C:: G ::GGUAGGGGAGCGUUC:G ::C+G GAA:G: ::C:GU+A:G:: :C:GGAG:: C:GAAGUG
gi_545778205_gb_U000 3425614 CGcUUAUGCGUUGUUGGGUAGGGGAGCGUUCUGUAaGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUG 3425534
**888899*************************9999******************************************** PP
NC
,,,,,}}}}}}{{-----{{,,,,,<<<<<<_______>>>>>>{{{{,,,,{{{{,,{{,,,<<<<<<---<<_____>> CS
RF02541 1292 AgaAUGccGgcacgAGUAgCGAuAAgggggGUGAGAAuCcccccCGCCGaAAgcCcAAGGuUUCCuggguAAgGuUaaUCc 1372
GAAUGC:G:CA:+AGUA:CGAUAA:G:GGGUGA AA CCC:C:CGCCG AAG:CCAAGG UUCCUG :+AA:GUUAAUC:
gi_545778205_gb_U000 3425533 CGAAUGCUGACAUAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCG 3425453
********************************************************************************* PP
v NC
->>>>>>,,,,,,[[[[,<<---<<<-<-<<<____>>>->->>>--->>,,,<<<<<________>>>>>,,(((((((( CS
RF02541 1373 gcccaGGGUuAGuCGggaCCUAAGgcGaGGccGAaAggCGuAgcCGAUGGaaAgcgGGUuAAuAuUCCcgcaCcgcccggg 1453
G: CAGGGU AGUCG: +CCUAAG:CGAGGCCGAAAGGCGUAG:CGAUGG+AA:C:GGUUAAUAUUCC:G:AC::: :G::
gi_545778205_gb_U000 3425452 GGGCAGGGUGAGUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUU 3425372
********************************************************************************* PP
v NC
(((-----((--((((((---((((--(((--(((((<<<<<<__________>>>>>><<--<<<<---<<<.-<<<<<< CS
RF02541 1454 gccuuuaagcgacGgggcGACgcagaaggcuaggcgcgcgggcuguuGGaagugcccgcccaagcccuuaggc.ugggggg 1533
:C: GCGA:G:GG GACG:AGAAGGCUA:G::::C:GG: G+ GG++GU:CC:G:::AA:C::+UA:GC + :::::
gi_545778205_gb_U000 3425371 ACU-----GCGAAGGGGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCuGGUUUUC 3425296
***.....*****************************************************************99999999 PP
vv vv NC
<-<<_____>>>>>>>>>---.>>>--->>>>--->>,<<<<<<<____>>>>>>>,,)))))---)))---))))----- CS
RF02541 1534 cAGguAAAucCgccccccaau.gccgaggggcgaugggccgccgcuuaagcggcggaggcgccgaagccaugcugcCaaGA 1613
CAGG+AAAUCCG::::: A+ GC:GAG::G:GAU:: :C:CU+ +G:G: AG:::C:+A+GCC UGCU:CCA GA
gi_545778205_gb_U000 3425295 CAGGCAAAUCCGGAAAAUCAAgGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGA 3425215
9**********99999998888*********************************************************** PP
v v NC
---))))))--))---.)))))))))))]]]],,}},,,,,<<______>>,}}}},<<<<_____>>>>,,}}}},,{{{ CS
RF02541 1614 AAAgcccCgaagcuaa.ggccccgggcgccCGUACCguAAACCGACACAGGUgGgcagGgaGAGaAucCcaAGGCGcucGg 1693
AAA CC:C:AAGC++ :G:::C: ::: :CGUACC +AAACCGACACAGGUGG:CAGG:AGAGAAU:CCAAGGCGCU:G:
gi_545778205_gb_U000 3425214 AAAGCCUCUAAGCAUCaGGUAACAUCAAAUCGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGA 3425134
**************989**************************************************************** PP
vv NC
{----{{{{{{{{-{{{,,,,,,,,,,,,,,<<<<<---<<____>>---->>>>><<<<<<................<<< CS
RF02541 1694 GagAAcccuggucAAGgAACUCGGCAAAaUagcccCGUAccUUcGggAgAAGgggcgCCccc................ccg 1758
GAGAAC:C:GGU:AAGGAACU GGCAAAAU+G::CCGUA:CUUCGG:AGAAGG::C:C:::: G
gi_545778205_gb_U000 3425133 GAGAACUCGGGUGAAGGAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUauguaggugaagcgacUUG 3425053
**************************************************************9977766666665554444 PP
vv NC
<<<____>>>>>>...>>>>>><___>,,,,,,,[[[[[[[[[,,<<<_________>>>,,<<<<<<<<<--<<<<____ CS
RF02541 1759 ggcguaagcccgg...gggGGccGCAgagAauaGGcccgggCGACUGuUUAccAAAAaCACAggccucugCuAagucGuAA 1836
::CGU G::C ::::G:CG AGA A AG::::: :C:ACUGUUUA++AAAAACACAG::CU:UGC+AA::CG+AA
gi_545778205_gb_U000 3425052 CUCGU-GGAGCU-gaaAUCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAA 3424974
44433.244444.488***************************************************************** PP
vv vv vv vv NC
>>>>-->-->>>>>>>>,,((((,<<<--<<<<<<<--<<<---<<-<<<<<<<--<<____>>--->>>>>>>->>---> CS
RF02541 1837 gacgAuGUAuaggggcuGAcGCCUGCCCGGUgCcgGAAGGuUAAgggccgggGuuAgcGcaAgcgAAgCcccggAccgAAg 1917
G::GA+GUAUA:GG::UGACGCCUGCCCGGUGCCGGAAGGUUAA G :G:GUUAGCGCAAGCGAAGC:C: A GAAG
gi_545778205_gb_U000 3424973 GUGGACGUAUACGGUGUGACGCCUGCCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAG 3424893
********************************************************************************* PP
NC
>>>>>>>-->>>>><<<<<<_______>>>>>><___>,,,,,<---------<<<<<<_____>>>>>>>,,,,,,,,,) CS
RF02541 1918 CCCcgGuAAACGGCGgCCGUAACUAUAACGGuCCUAAGGUAGCGAAAUUCCUUGuCGGgUAAGUuCCGaCCuGCACGAAuG 1998
CCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUG
gi_545778205_gb_U000 3424892 CCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUG 3424812
********************************************************************************* PP
NC
))),,,]]-]]]]]]],,,,}}}-}}}}}}}}-}}}}}}----}}},,,,<<<<<________>>>>>,,{{{{{{{{-{{ CS
RF02541 1999 GCgUAACGAcccgggCgCUGuCUCgaccagggaCcCgGcGAAAguguAgUgccgGUgAAGAUGCcggcUaCcCgCggcugG 2079
GCGUAA:GA: :::::GCUGUCUC:ACC:G:GAC:C:G:GAAA:UG+A U: C:GUGAAGAUGC:G :UACCC:CGGC+:G
gi_545778205_gb_U000 3424811 GCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAG 3424731
********************************************************************************* PP
v NC
{-{{,,,,,,{{{{-{{{{{{{,((((---(((((((,,<<<<<<<<<<<<<<<<<<---------<<<<<--<<<----- CS
RF02541 2080 ACgGAAAGACCCCGUGgAcCUUUACUguAgccuggcauUGgcccccggcgcggcccGUguAGgAUAgGuGGGAGgCuuuGA 2160
ACGGAAAGACCCCGUG:ACCUUUACU:UAGC::G:CA UG::C::::: : :: ::GUGUAGGAUAGGUGGGAGGCUU+GA
gi_545778205_gb_U000 3424730 ACGGAAAGACCCCGUGAACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGA 3424650
********************************************************************************* PP
v NC
-<<<<<<<<____>>>>>>>>--->>>------------>>>>>>>>>>>>>>>>>>>>>>>,,,<<<-<<<<<<_____> CS
RF02541 2161 AgccggggcgcuAgccccggcGGAGcCaacguUGAaAUACCaCcCgggccgcgccgggggcCUAACccagccccguaAucc 2241
A:::::G:CGC+AG:C:::::GGAGCC+AC UUGAAAUACCACCC:: :: : :::::G::CUAAC::+ :CCCGUAAUCC
gi_545778205_gb_U000 3424649 AGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCC 3424569
********************************************************************************* PP
NC
>>>>>>>>,,,,,)))))))----)))),,<<<<_____>>>><<<<<<___________>>>>>>{,[[,,,,((((((< CS
RF02541 2242 ggggcggGGACagugccagguGGGcAGUUUGaCuGGGGCgGuCgCCUCCuAAAgaGUAACGGAGGcGcgCaAAGGuuccCU 2322
GGG: ::GGACAGUG:C::GUGGG:AGUUUGACUGGGGCGGUC:CCUCCUAAAGAGUAACGGAGG:GC:C+AAGGUU::CU
gi_545778205_gb_U000 3424568 GGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCU 3424488
********************************************************************************* PP
NC
<-<<<<<<_______>>>>>>--->><<______>>,,,,)))))),,,,<<<<<<<<<______>>>>>>>>>,<<<___ CS
RF02541 2323 CAgcgcGguuGGaAAcCgcgcguaGAGcGcAAaggCAuAAGggagCuUgACuGcccGacugACAaguCgggCaGaggCGAA 2403
:A:C::G:U+GGA A:C::G:G +:AG:GCAA+G:CAUAAG::AGCUUGACUGC::G::UGAC ::C::GCAG+:GCGAA
gi_545778205_gb_U000 3424487 AAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAA 3424407
********************************************************************************* PP
NC
_>>>,]],,,,,,,,,,<<<<<<<-<<________>>>>>>>>>,,,,,},,,,,,}}}}}--}}}}}},,,,,,,,<<<- CS
RF02541 2404 AGccGGccuUAGUGAUCCggcGGcuccgagUGGaAgggCCgucGCUCAACGGAUAAAAGgUACcCCGGGGAUAACAGGCug 2484
AGC:GG:C+UAGUGAUCCGG:GG:UC:GA+UGGAA:G:CC:UCGCUCAACGGAUAAAAGGUAC:CCGGGGAUAACAGGCUG
gi_545778205_gb_U000 3424406 AGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUG 3424326
********************************************************************************* PP
NC
<<<<<<<<---<<_______>>--->>>>>>>-->>>>,,,,,,,,,,(((((((((((,,<<-<<<<<<______>>>>> CS
RF02541 2485 AucccccCCAAGaGUuCAuAuCGACGggggggUUUgGCACCUCGAUGUCgGCUCauCgCAUCCUGGGgCuGgAGuAgGuCC 2565
AU:CC:CCCAAGAGUUCAUAUCGACGG:GG:GUUUGGCACCUCGAUGUCGGCUCAUC:CAUCCUGGGGCUG+AGUAGGUCC
gi_545778205_gb_U000 3424325 AUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCC 3424245
********************************************************************************* PP
vv vv NC
>--->>,<<<<<_____>>>>>,,,,,)))))--)--))))-),,,,,<<<<<<<____>>>->>>>,,,,}}--}}}}}} CS
RF02541 2566 CAAGGGUucGGCUGUUCGCCgaUUAAAGcGguACGuGAGCuGGGUUcAGaaCGUCGUGAGACAGuuCGGUCCcUAUCcgcc 2646
CAAGGGU GCUGUUCGC UUAAAG:GGUACG+GAGCUGGGUU+AGAACGUCGUGAGACAGUUCGGUCCCUAUC:GCC
gi_545778205_gb_U000 3424244 CAAGGGUGAUGCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC 3424164
********************************************************************************* PP
NC
}}}}},,,,((((((((--((((,,<<<<<<<_______________>>>>>>><<<<<<---<<<----<<<<<<<<<<< CS
RF02541 2647 GcGgGcGuaGGaggccUGAggGgauccgccccUAGUACGAGAGGACCggggcgggCggaCCucugGUGuacCgGuuGucgc 2727
G:GGGCG +GGAG::CUGAGGGG +C::C:CCUAGUACGAGAGGACCGG:G::G:CG:A:C+CU:GUGU C:GGUUGUC::
gi_545778205_gb_U000 3424163 GUGGGCGCUGGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAU 3424083
********************************************************************************* PP
NC
____>>>>>>-->>>>>---->>>->>>>>>,,<<<----<<<<<___________>>>>>---->>>,))))------)) CS
RF02541 2728 GCcAgcggCauugCcGgGUAGCcauGuccGcaaggGAUAAcCGCUGAAaGCAUCUAAGCGgGAAgCccacCccAAGAuaAg 2808
GCCA::GGCA UGCC:GGUAGC:A+:U:CG:AA :GAUAA::GCUGAAAGCAUCUAAGC::GAA+C: CCCC AGAU AG
gi_545778205_gb_U000 3424082 GCCAAUGGCACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAG 3424002
********************************************************************************* PP
vv vv NC
)))))),,<<<...._____>>>.,(--((((<<<<<_______>>>>>,,,,<<<<<<<<<<<--<--<<<<<____>>> CS
RF02541 2809 gccuCCcucgg....uaaauccg.uuaAGgccccuggaAGAcuAccaggUuGAuaGgccggcgGUGcAAgcgcgGuAAcgc 2884
::CUCCCU::: UAA ::: U AAGG C:U:GAAGAC AC:A:GUUGAUAGGCCGG GUG:AA:CGC:G+ A:GC
gi_545778205_gb_U000 3424001 UUCUCCCUGACccuuUAAGGGUCcUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGC 3423921
*********99998655666999789******************************************************* PP
vv vv NC
>>>--->>>->>>>>->>>,,,))))-),,,}}}}}}}}:: CS
RF02541 2885 gcguAGCcgAccgguACuaAUaggcCgauaggcuugaccuu 2925
G:: AGC ACCGGUACUAAU CCG AGGCUU:ACCUU
gi_545778205_gb_U000 3423920 GUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU 3423880
***************************************** PP
|
