Alignments: NC
{{{{{{{{,,,,,,{{{{{{{{{{-----{{{,,{{{{{{{{{{{[[,,,,,((((<<<________>>>,,,,,<<<<<< CS
RF02541 1 ggucaagcuauuAAggGCgcgcGGuGGAUGCCUuGGcgccgggaggCGAuGAgGGaCGcGguaagCugCGAuAAGCcccGg 81
GGU:AAGC A UAA::G::C:CGGUGGAUGCC UGGC:::::GAGGCGAUGA:GGACG:G UAA CU:CGAUAAGC::CGG
gi_545778205_gb_U000 4037519 GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCGG 4037599
********************************************************************************* PP
NC
<--<<<_______>>>----.->>>>>>>,,,)))),,,<<<____>>><<<<<<<______>>>>>>>,<<<<<<<<<__ CS
RF02541 82 ggAGccGcaAacAggCuuuG.AccCgggGAUuuCCcAAUgGGGaAACCcgcccgggguaauacccgggcAcccccggccGA 161
: AG::G +A A::C UU A:CCG::GAUUUCC:AAUGGGGAAACCC:::::G: ++ :C:::::A:C:::::C:GA
gi_545778205_gb_U000 4037600 UAAGGUGAUAUGAACCGUUAuAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGU--UUCGACACACUAUCAUUAACUGA 4037678
****************88877***********************************..6778******************* PP
NC
_______>>>>>>>>>,]],,,<<<<<<-----<<____>>------>>>>>->,,,,,,,,,<<____>>,,{<<<<<-- CS
RF02541 162 AuacAUAggccgggggaGcaAACccgGgGAAcUGaAACAuCUaAGUAcCcggAGGAAAAGAAAgcAAaagcgAuuCCccuA 242
AU CAUA:G:::::G:+GC+AACC:GGGGAACUGAAACAUCUAAGUACCC:GAGGAAAAGAAA:CAA G:GAUUCCCC A
gi_545778205_gb_U000 4037679 AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCCA 4037759
********************************************************************************* PP
v NC
---<<_____>>---->>>>>,,[[[[,,,,<<<<<<<________>>>>>>>,,,,,,(((-(((((-------(((((( CS
RF02541 243 GUAGcGGCGAgCGAAaggGGaauaGcCcAAACcggggguuauuguucccccgGGGUugugGGacccccaaauuaagagccc 323
GUAGCGGCGAGCGAA+GGGGA AGCCCA :::C + +A+:AG: :
gi_545778205_gb_U000 4037760 GUAGCGGCGAGCGAACGGGGAGCAGCCCA----------------------------------GAGCCUG--AAUCAGUGU 4037804
***************************98..................................9999988..899****** PP
v NC
(((((((-(((,,,<<<<<______>>>>>,,<___>,<<<_______>>>,,,)))---)))))))))))))--)))))- CS
RF02541 324 cccggcuAgccGAAcggccUGGAAaggccgaCCauAGagGGUGAuAGuCCcGUAggcgaAagccggggggcucuugggggu 404
:::: :UAG::GAA :G:CUGGAAAG:C: +C:AUA:AGGGUGA AG+CCCGUA::C AAA: ::::: :CU:U G:::+
gi_545778205_gb_U000 4037805 GUGUGUUAGUGGAAGCGUCUGGAAAGGCGUGCGAUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCG 4037885
***************************************************************************999999 PP
NC
--))),,,,,<<<<<<<<<_______>>>>>>>>>,,,,,,<<<<<______>>>>>,,]]]],,},,}}-}}}}}}}-}} CS
RF02541 405 auCCcgAGUAgggCggggcAcGuGaAgccccGcccGAAuaugggggGACCAccccccAAGgCuAAaUAcuccccggcgACC 485
AU GAGUA:G:C:GG::ACGUG ::CC:G:C:GAAUAUGG:GGGACCA+CC:CCAAGGCUAAAUACUCC:::::GACC
gi_545778205_gb_U000 4037886 AU---GAGUAGGGCGGGACACGUGGUAUCCUGUCUGAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACC 4037963
98...**************************************************************************** PP
NC
,,,,,,,,,,,,,,,<<____>>,,,,}},,,,,,,,,<<<<_____>>>>,,,,,,,,,,,,,}-----}}}}}}}}}}, CS
RF02541 486 GAUAGuGaAcuAGUACCGUGAGGGAAAGGUGAAAAGaACCCcggugAgGGGAGUGAAAuAGaaCCUGAAACCgcgcGCccA 566
GAUAGUGAAC AGUACCGUGAGGGAAAGG GAAAAGAACCCCGG+GAGGGGAGUGAAA AGAACCUGAAACCG:G::C::A
gi_545778205_gb_U000 4037964 GAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUA 4038044
********************************************************************************* PP
v v NC
,,,,{,<<<<<<<<<<<________>>>>>>>>>>>,,<<<<________>>>>{{{{{{,,,,(((((((((((((,,<< CS
RF02541 567 CAAgcaGucGcggcccgauuuuaaucgggccgCggCGUcCcUUUUGuAuAAgGggcCggCGAgUugccgcgcgcggCaAGg 647
CAAGCAGU G:::C:CG UUA+ CG:G:::C GCGU C:UUUUGUAUAA:G G:C:GCGA UU::: :::G::GCAAGG
gi_545778205_gb_U000 4038045 CAAGCAGUGGGAGCACG--CUUAGGCGUGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGG 4038123
*****************..667777******************************************************** PP
NC
<<--<<<_____>>>-->>>>,,,<<____>>,<<<<<_____>>>>>,,,,))))))))))))),,[[-[---[[[[[[, CS
RF02541 648 uUAAgccugauaggcGuAgcCGuAGcGAAAgCGcGuCcgAAuAgGgCgauuAGucgcgcgcggcaGACcCGAAACcggGuG 728
UUAA:C +AUA G:G+AGCCG+AG:GAAA:CG:GUC:+AA :GGC:+U+AGU::C::: :::AGACCCGAAACC:GGUG
gi_545778205_gb_U000 4038124 UUAACC-GAAUA-GGGGAGCCGAAGGGAAACCGAGUCUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUG 4038202
*****9.67777.99****************************************************************** PP
NC
,,((((((((((((,<<<<---<<<<<<<____>>>>>>>---->>>>,,,<<<-<<<<<________>>>>>>>>,,)-) CS
RF02541 729 AuCuaccCauggcCAGGguGAAgccgggcUAAagcccgguGGAGgcCCGAACccacgcccGUUGAAAAgggcgggGAUGAg 809
AUC A:CCAUG :CAGG:UGAAG::: G:UAA+:C :::UGGAGG:CCGAACC:AC::::GUUGAAAA::::G:GGAUGA:
gi_545778205_gb_U000 4038203 AUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACUAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGAC 4038283
********************************************************************************* PP
NC
)))))))))),<<<_____>>>,,,,,,]]]]]]------]-]],,[[[[[[,,,,<<<<<____>>>>>,<<<<<<<<-- CS
RF02541 810 cuguGgguaGgGGcGAAAggCCAAUCaAaCccgGaGAUAGCUgGUUCUCccCGAAAugccuUuAGgggcaGCgucgggcga 890
UGUGG:U GGGG:GAAAG:CCAAUCAAACC:GGAGAUAGCUGGUUCUCCCCGAAA::::UUUAGG::::GC:UCG:G:++
gi_545778205_gb_U000 4038284 UUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAU 4038364
********************************************************************************* PP
v v NC
<<<<<<<<<<<----<<<---<<<-<<<<---<<<<<<<____.>>>>>->>--->>>>->>>-->>->---->>>>>>>. CS
RF02541 891 ucccccccggcGGUAgaGCACuggaugggcuAgGgggccuaaa.ggccuACcaAacccaaccaAACuccGAAUgccgggg. 969
UC::C:CCGG GGUAGAGCACUG +U:GGC+AGGG:G:C + + G:C:UACCAA CC:A CAAACU CGAAU CCGG:G
gi_545778205_gb_U000 4038365 UCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAGGGGGUCAUCCcGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGa 4038445
***************************************99989************************************9 PP
NC
>>>-->>>>>>>>->,,,<<<<<<<<<<______>>>>>>>>>>,,,,<<<______>>>,,,((((-(((---(((---- CS
RF02541 970 gggaaagcccggcAGucAgaccgcgggcGaUAAgguccgcggucgAgAGGGaAAcAaCCCAGAcCgcCagcUAAGGuCCCu 1050
::G++A:C:CGG:AG+CA:AC::CGGG:G+UAA :UCCG::GU:+AGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCC+
gi_545778205_gb_U000 4038446 AUGUUAUCACGGGAGACACACGGCGGGUGCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCA 4038526
9******************************************************************************** PP
vv NC
--(-((((((-----------(((-((((((((((-------(((((,<<<--<<<_________>>>-->>><___><-- CS
RF02541 1051 AAgugcggGcUAAGUGggAAAGGcuGuggggccgCuaAgACAaCcaGGAgGUUGGCUUAGAAGCAGCCAUCcUuuAAaGAg 1131
AAGU:::GG:UAAGUGGGAAA:G:UGU:GG ::C AGACA:CCAGGA:GUUGGCUUAGAAGCAGCCAUC:UUUAAAGA+
gi_545778205_gb_U000 4038527 AAGUCAUGGUUAAGUGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAA 4038607
********************************************************************************* PP
vv NC
-<<______>>->,)))))---)))))))))))))--------------------))))))))))---)))))))<<<<<< CS
RF02541 1132 uGCGUAAuAGCUCACugGuCaAGcggccccgCgCCGAaAAUguaaCGGGGCUcAAgCccgccaCCGAAgcugcGggcucgc 1212
+GCGUAAUAGCUCACUGG:C+AG:: CC:GC:C:GAA AUGUAACGGGGCU AA:CC:::CACCGAAGCUGCGG:: C :
gi_545778205_gb_U000 4038608 AGCGUAAUAGCUCACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCU-AAACCAUGCACCGAAGCUGCGGCAGCGA 4038687
****************************************************.**************************** PP
vv vv NC
<<_____>>>>>>>>,,,,]]]]]]<-<<<<<<<.<<<------<<<<<<<<____>>>>>>>>--->>>>>>>>>>-->, CS
RF02541 1213 gguuuaaccgcgagcGGUAGggGAGCguuccgcc.cgcgguGAAggcgccccGuaAggggcgccGGAgcgggcggaaGuGA 1292
:: U++ ::: G ::GGUAGGGGAGCGUUC:G ::C+GUGAA:G: ::C:GU+A:G:: :C:GGAG:: C:GAAGUG
gi_545778205_gb_U000 4038688 CACUAUGUGUUGUUGGGUAGGGGAGCGUUCUGUAaGCCUGUGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGC 4038768
********************************9999********************************************* PP
NC
,,,,}}}}}}{{-----{{,,,,,<<<<<<_______>>>>>>{{{{,,,,{{{{,,{{,,,<<<<<<---<<_____>>- CS
RF02541 1293 gaAUGccGgcacgAGUAgCGAuAAgggggGUGAGAAuCcccccCGCCGaAAgcCcAAGGuUUCCuggguAAgGuUaaUCcg 1373
GAAUGC:G:CA:+AGUA:CGAUAA:G:GGGUGA AA CCC:C:CGCCG AAG:CCAAGG UUCCUG :+AA:GUUAAUC:G
gi_545778205_gb_U000 4038769 GAAUGCUGACAUAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGG 4038849
********************************************************************************* PP
v NC
>>>>>>,,,,,,[[[[,<<---<<<-<-<<<____>>>->->>>--->>,,,<<<<<________>>>>>,,((((((((( CS
RF02541 1374 cccaGGGUuAGuCGggaCCUAAGgcGaGGccGAaAggCGuAgcCGAUGGaaAgcgGGUuAAuAuUCCcgcaCcgcccgggg 1454
: CAGGGU AGUCG: +CCUAAG:CGAGGCCGAAAGGCGUAG:CGAUGG+AA:C:GGUUAAUAUUCC:G:AC::: :G:::
gi_545778205_gb_U000 4038850 GGCAGGGUGAGUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUA 4038930
********************************************************************************* PP
v NC
((-----((--((((((---((((--(((--(((((<<<<<<__________>>>>>><<--<<<<---<<<.-<<<<<<< CS
RF02541 1455 ccuuuaagcgacGgggcGACgcagaaggcuaggcgcgcgggcuguuGGaagugcccgcccaagcccuuaggc.uggggggc 1534
C: GCGA:G:GG GACG:AGAAGGCUA:G::::C:GG: G+ GG++GU:CC:G:::AA:C::+UA:GC + :::::C
gi_545778205_gb_U000 4038931 CU-----GCGAAGGGGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCuGGUUUUCC 4039006
**.....*****************************************************************999999999 PP
vv vv NC
-<<_____>>>>>>>>>---.>>>--->>>>--->>,<<<<<<<____>>>>>>>,,)))))---)))---))))------ CS
RF02541 1535 AGguAAAucCgccccccaau.gccgaggggcgaugggccgccgcuuaagcggcggaggcgccgaagccaugcugcCaaGAA 1614
AGG+AAAUCCG::::: A+ GC:GAG::G:GAU:: :C:CU+ +G:G: AG:::C:+A+GCC UGCU:CCA GAA
gi_545778205_gb_U000 4039007 AGGCAAAUCCGGAAAAUCAAgGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAA 4039087
**********99999998888************************************************************ PP
v v NC
--))))))--))---.)))))))))))]]]],,}},,,,,<<______>>,}}}},<<<<_____>>>>,,}}}},,{{{{ CS
RF02541 1615 AAgcccCgaagcuaa.ggccccgggcgccCGUACCguAAACCGACACAGGUgGgcagGgaGAGaAucCcaAGGCGcucGgG 1694
AA CC:C:AAGC++ :G:::C: ::: :CGUACC +AAACCGACACAGGUGG:CAGG:AGAGAAU:CCAAGGCGCU:G:G
gi_545778205_gb_U000 4039088 AAGCCUCUAAGCAUCaGGUAACAUCAAAUCGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAG 4039168
*************989***************************************************************** PP
vv NC
----{{{{{{{{-{{{,,,,,,,,,,,,,,<<<<<---<<____>>---->>>>><<<<<<................<<<< CS
RF02541 1695 agAAcccuggucAAGgAACUCGGCAAAaUagcccCGUAccUUcGggAgAAGgggcgCCccc................ccgg 1759
AGAAC:C:GGU:AAGGAACU GGCAAAAU+G::CCGUA:CUUCGG:AGAAGG::C:C:::: G:
gi_545778205_gb_U000 4039169 AGAACUCGGGUGAAGGAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUauguaggugaagcgacUUGC 4039249
*************************************************************99777666666655544444 PP
vv NC
<<____>>>>>>...>>>>>><___>,,,,,,,[[[[[[[[[,,<<<_________>>>,,<<<<<<<<<--<<<<____> CS
RF02541 1760 gcguaagcccgg...gggGGccGCAgagAauaGGcccgggCGACUGuUUAccAAAAaCACAggccucugCuAagucGuAAg 1837
:CGU G::C ::::G:CG AGA A AG::::: :C:ACUGUUUA++AAAAACACAG::CU:UGC+AA::CG+AAG
gi_545778205_gb_U000 4039250 UCGU-GGAGCU-gaaAUCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAG 4039328
4433.244444.488****************************************************************** PP
vv vv vv vv NC
>>>-->-->>>>>>>>,,((((,<<<--<<<<<<<--<<<---<<-<<<<<<<--<<.____.>>--->>>>>>>->>--- CS
RF02541 1838 acgAuGUAuaggggcuGAcGCCUGCCCGGUgCcgGAAGGuUAAgggccgggGuuAgc.GcaA.gcgAAgCcccggAccgAA 1916
::GA+GUAUA:GG::UGACGCCUGCCCGGUGCCGGAAGGUUAA G :G:GUUAGC GCAA GCGAAGC:C: A GAA
gi_545778205_gb_U000 4039329 UGGACGUAUACGGUGUGACGCCUGCCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCcGCAAgGCGAAGCUCUUGAUCGAA 4039409
********************************************************99888889***************** PP
NC
>>>>>>>>-->>>>><<<<<<_______>>>>>><___>,,,,,<---------<<<<<<_____>>>>>>>,,,,,,,,, CS
RF02541 1917 gCCCcgGuAAACGGCGgCCGUAACUAUAACGGuCCUAAGGUAGCGAAAUUCCUUGuCGGgUAAGUuCCGaCCuGCACGAAu 1997
GCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAU
gi_545778205_gb_U000 4039410 GCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAU 4039490
********************************************************************************* PP
NC
)))),,,]]-]]]]]]],,,,}}}-}}}}}}}}-}}}}}}----}}},,,,<<<<<________>>>>>,,{{{{{{{{-{ CS
RF02541 1998 GGCgUAACGAcccgggCgCUGuCUCgaccagggaCcCgGcGAAAguguAgUgccgGUgAAGAUGCcggcUaCcCgCggcug 2078
GGCGUAA:GA: :::::GCUGUCUC:ACC:G:GAC:C:G:GAAA:UG+A U: C:GUGAAGAUGC:G :UACCC:CGGC+:
gi_545778205_gb_U000 4039491 GGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAA 4039571
********************************************************************************* PP
v NC
{{-{{,,,,,,{{{{-{{{{{{{,((((---(((((((,,<<<<<<<<<<<<<<<<<<---------<<<<<--<<<---- CS
RF02541 2079 GACgGAAAGACCCCGUGgAcCUUUACUguAgccuggcauUGgcccccggcgcggcccGUguAGgAUAgGuGGGAGgCuuuG 2159
GACGGAAAGACCCCGUG:ACCUUUACU:UAGC::G:CA UG::C::::: : :: ::GUGUAGGAUAGGUGGGAGGCUUUG
gi_545778205_gb_U000 4039572 GACGGAAAGACCCCGUGAACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUG 4039652
********************************************************************************* PP
v NC
--<<<<<<<<____>>>>>>>>--->>>------------>>>>>>>>>>>>>>>>>>>>>>>,,,<<<-<<<<<<_____ CS
RF02541 2160 AAgccggggcgcuAgccccggcGGAGcCaacguUGAaAUACCaCcCgggccgcgccgggggcCUAACccagccccguaAuc 2240
AA:::::G:CGC+AG:C:::::GGAGCC+AC UUGAAAUACCACCC:: :: : :::::G::CUAAC::+ :CCCGUAAUC
gi_545778205_gb_U000 4039653 AAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUC 4039733
********************************************************************************* PP
NC
>>>>>>>>>,,,,,)))))))----)))),,<<<<_____>>>><<<<<<___________>>>>>>{,[[,,,,(((((( CS
RF02541 2241 cggggcggGGACagugccagguGGGcAGUUUGaCuGGGGCgGuCgCCUCCuAAAgaGUAACGGAGGcGcgCaAAGGuuccC 2321
CGGG: ::GGACAGUG:C::GUGGG:AGUUUGACUGGGGCGGUC:CCUCCUAAAGAGUAACGGAGG:GC:C+AAGGUU::C
gi_545778205_gb_U000 4039734 CGGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGC 4039814
********************************************************************************* PP
NC
<<-<<<<<<_______>>>>>>--->><<______>>,,,,)))))),,,,<<<<<<<<<______>>>>>>>>>,<<<__ CS
RF02541 2322 UCAgcgcGguuGGaAAcCgcgcguaGAGcGcAAaggCAuAAGggagCuUgACuGcccGacugACAaguCgggCaGaggCGA 2402
U:A:C::G:U+GGA A:C::G:G +:AG:GCAA+G:CAUAAG::AGCUUGACUGC::G::UGAC ::C::GCAG+:GCGA
gi_545778205_gb_U000 4039815 UAAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGA 4039895
********************************************************************************* PP
NC
__>>>,]],,,,,,,,,,<<<<<<<-<<________>>>>>>>>>,,,,,},,,,,,}}}}}--}}}}}},,,,,,,,<<< CS
RF02541 2403 AAGccGGccuUAGUGAUCCggcGGcuccgagUGGaAgggCCgucGCUCAACGGAUAAAAGgUACcCCGGGGAUAACAGGCu 2483
AAGC:GG:C+UAGUGAUCCGG:GG:UC:GA+UGGAA:G:CC:UCGCUCAACGGAUAAAAGGUAC:CCGGGGAUAACAGGCU
gi_545778205_gb_U000 4039896 AAGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCU 4039976
********************************************************************************* PP
NC
-<<<<<<<<---<<_______>>--->>>>>>>-->>>>,,,,,,,,,,(((((((((((,,<<-<<<<<<______>>>> CS
RF02541 2484 gAucccccCCAAGaGUuCAuAuCGACGggggggUUUgGCACCUCGAUGUCgGCUCauCgCAUCCUGGGgCuGgAGuAgGuC 2564
GAU:CC:CCCAAGAGUUCAUAUCGACGG:GG:GUUUGGCACCUCGAUGUCGGCUCAUC:CAUCCUGGGGCUG+AGUAGGUC
gi_545778205_gb_U000 4039977 GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUC 4040057
********************************************************************************* PP
NC
>>--->>,<<<<<_____>>>>>,,,,,)))))--)--))))-),,,,,<<<<<<<____>>>->>>>,,,,}}--}}}}} CS
RF02541 2565 CCAAGGGUucGGCUGUUCGCCgaUUAAAGcGguACGuGAGCuGGGUUcAGaaCGUCGUGAGACAGuuCGGUCCcUAUCcgc 2645
CCAAGGGU::GGCUGUUCGCC::UUAAAG:GGUACG+GAGCUGGGUU+AGAACGUCGUGAGACAGUUCGGUCCCUAUC:GC
gi_545778205_gb_U000 4040058 CCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGC 4040138
********************************************************************************* PP
NC
}}}}}},,,,((((((((--((((,,<<<<<<<_______________>>>>>>><<<<<<---<<<----<<<<<<<<<< CS
RF02541 2646 cGcGgGcGuaGGaggccUGAggGgauccgccccUAGUACGAGAGGACCggggcgggCggaCCucugGUGuacCgGuuGucg 2726
CG:GGGCG +GGAG::CUGAGGGG +C::C:CCUAGUACGAGAGGACCGG:G::G:CG:A:C+CU:GUGU C:GGUUGUC:
gi_545778205_gb_U000 4040139 CGUGGGCGCUGGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCA 4040219
********************************************************************************* PP
NC
<____>>>>>>-->>>>>---->>>->>>>>>,,<<<----<<<<<___________>>>>>---->>>,))))------) CS
RF02541 2727 cGCcAgcggCauugCcGgGUAGCcauGuccGcaaggGAUAAcCGCUGAAaGCAUCUAAGCGgGAAgCccacCccAAGAuaA 2807
:GCCA::GGCA UGCC:GGUAGC:A+:U:CG:AA :GAUAA::GCUGAAAGCAUCUAAGC::GAA+C: CCCC AGAU A
gi_545778205_gb_U000 4040220 UGCCAAUGGCACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGA 4040300
********************************************************************************* PP
vv vv NC
))))))),,<<<...._____>>>.,(--((((<<<<<_______>>>>>,,,,<<<<<<<<<<<--<--<<<<<____>> CS
RF02541 2808 ggccuCCcucgg....uaaauccg.uuaAGgccccuggaAGAcuAccaggUuGAuaGgccggcgGUGcAAgcgcgGuAAcg 2883
G::CUCCCU::: U A +::: U AAGG C:U:GAAGAC AC:A:GUUGAUAGGCCGG GUG:AA:CGC:G+ A:G
gi_545778205_gb_U000 4040301 GUUCUCCCUGACuccuUGAGAGUCcUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUG 4040381
************988656677999789****************************************************** PP
vv vv NC
>>>>--->>>->>>>>->>>,,,))))-),,,}}}}}}}}:: CS
RF02541 2884 cgcguAGCcgAccgguACuaAUaggcCgauaggcuugaccuu 2925
CG:: AGC ACCGGUACUAAU CCG AGGCUU:ACCUU
gi_545778205_gb_U000 4040382 CGUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU 4040423
****************************************** PP
>> |
