Alignments: NC
{{{{{{{{,,,,,,{{{{{{{{{{-----{{{,,{{{{{{{{{{{[[,,,,,((((<<<________>>>,,,,,<<<<<< CS
RF02541 1 ggucaagcuauuAAggGCgcgcGGuGGAUGCCUuGGcgccgggaggCGAuGAgGGaCGcGguaagCugCGAuAAGCcccGg 81
GGU:AAGC A UAA::G::C:CGGUGGAUGCC UGGC:::::GAGGCGAUGA:GGACG:G UAA CU:CGAUAAGC::CGG
gi_545778205_gb_U000 4168641 GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCGG 4168721
********************************************************************************* PP
NC
<--<<<_______>>>----.->>>>>>>,,,)))),,,<<<____>>><<<<<<<______>>>>>>>,<<<<<<<<<__ CS
RF02541 82 ggAGccGcaAacAggCuuuG.AccCgggGAUuuCCcAAUgGGGaAACCcgcccgggguaauacccgggcAcccccggccGA 161
: AG::G +A A::C UU A:CCG::GAUUUCC:AAUGGGGAAACCC:::::G: ++ :C:::::A:C:::::C:GA
gi_545778205_gb_U000 4168722 UAAGGUGAUAUGAACCGUUAuAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGU--UUCGACACACUAUCAUUAACUGA 4168800
****************88877***********************************..6778******************* PP
NC
_______>>>>>>>>>,]],,,<<<<<<-----<<____>>------>>>>>->,,,,,,,,,<<____>>,,{<<<<<-- CS
RF02541 162 AuacAUAggccgggggaGcaAACccgGgGAAcUGaAACAuCUaAGUAcCcggAGGAAAAGAAAgcAAaagcgAuuCCccuA 242
AU CAUA:G:::::G:+GC+AACC:GGGGAACUGAAACAUCUAAGUACCC:GAGGAAAAGAAA:CAA G:GAUUCCCC A
gi_545778205_gb_U000 4168801 AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCCA 4168881
********************************************************************************* PP
v NC
---<<_____>>---->>>>>,,[[[[,,,,<<<<<<<________>>>>>>>,,,,,,(((-(((((-------(((((( CS
RF02541 243 GUAGcGGCGAgCGAAaggGGaauaGcCcAAACcggggguuauuguucccccgGGGUugugGGacccccaaauuaagagccc 323
GUAGCGGCGAGCGAA+GGGGA AGCCCA :::C + +A+:AG: :
gi_545778205_gb_U000 4168882 GUAGCGGCGAGCGAACGGGGAGCAGCCCA----------------------------------GAGCCUG--AAUCAGUGU 4168926
***************************98..................................9999988..899****** PP
v NC
(((((((-(((,,,<<<<<______>>>>>,,<___>,<<<_______>>>,,,)))---)))))))))))))--)))))- CS
RF02541 324 cccggcuAgccGAAcggccUGGAAaggccgaCCauAGagGGUGAuAGuCCcGUAggcgaAagccggggggcucuugggggu 404
:::: :UAG::GAA::G:CUGGAAAG:C::+C:AUA:AGGGUGA AG+CCCGUA::C AAA: ::::: :CU:U G:::+
gi_545778205_gb_U000 4168927 GUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGAUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCG 4169007
***************************************************************************999999 PP
NC
--))),,,,,<<<<<<<<<_______>>>>>>>>>,,,,,,<<<<<______>>>>>,,]]]],,},,}}-}}}}}}}-}} CS
RF02541 405 auCCcgAGUAgggCggggcAcGuGaAgccccGcccGAAuaugggggGACCAccccccAAGgCuAAaUAcuccccggcgACC 485
AU GAGUA:G:C:GG::ACGUG ::CC:G:C:GAAUAUGG:GGGACCA+CC:CCAAGGCUAAAUACUCC:::::GACC
gi_545778205_gb_U000 4169008 AU---GAGUAGGGCGGGACACGUGGUAUCCUGUCUGAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACC 4169085
98...**************************************************************************** PP
NC
,,,,,,,,,,,,,,,<<____>>,,,,}},,,,,,,,,<<<<_____>>>>,,,,,,,,,,,,,}-----}}}}}}}}}}, CS
RF02541 486 GAUAGuGaAcuAGUACCGUGAGGGAAAGGUGAAAAGaACCCcggugAgGGGAGUGAAAuAGaaCCUGAAACCgcgcGCccA 566
GAUAGUGAAC AGUACCGUGAGGGAAAGG GAAAAGAACCCCGG+GAGGGGAGUGAAA AGAACCUGAAACCG:G::C::A
gi_545778205_gb_U000 4169086 GAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUA 4169166
********************************************************************************* PP
v v NC
,,,,{,<<<<<<<<<<<________>>>>>>>>>>>,,<<<<________>>>>{{{{{{,,,,(((((((((((((,,<< CS
RF02541 567 CAAgcaGucGcggcccgauuuuaaucgggccgCggCGUcCcUUUUGuAuAAgGggcCggCGAgUugccgcgcgcggCaAGg 647
CAAGCAGU G:::C:CG UUA+ CG:G:::C GCGU C:UUUUGUAUAA:G G:C:GCGA UU::: :::G::GCAAGG
gi_545778205_gb_U000 4169167 CAAGCAGUGGGAGCACG--CUUAGGCGUGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGG 4169245
*****************..667777******************************************************** PP
NC
<<--<<<_____>>>-->>>>,,,<<____>>,<<<<<_____>>>>>,,,,))))))))))))),,[[-[---[[[[[[, CS
RF02541 648 uUAAgccugauaggcGuAgcCGuAGcGAAAgCGcGuCcgAAuAgGgCgauuAGucgcgcgcggcaGACcCGAAACcggGuG 728
UUAA:C +AUA G:G+AGCCG+AG:GAAA:CG:GUC:+AA :GGC:+U+AGU::C::: :::AGACCCGAAACC:GGUG
gi_545778205_gb_U000 4169246 UUAACC-GAAUA-GGGGAGCCGAAGGGAAACCGAGUCUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUG 4169324
*****9.67777.99****************************************************************** PP
NC
,,((((((((((((,<<<<---<<<<<<<____>>>>>>>---->>>>,,,<<<-<<<<<________>>>>>>>>,,)-) CS
RF02541 729 AuCuaccCauggcCAGGguGAAgccgggcUAAagcccgguGGAGgcCCGAACccacgcccGUUGAAAAgggcgggGAUGAg 809
AUC A:CCAUG :CAGG:UGAAG::: G:UAA+:C :::UGGAGG:CCGAACC:AC::::GUUGAAAA::::G:GGAUGA:
gi_545778205_gb_U000 4169325 AUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACUAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGAC 4169405
********************************************************************************* PP
NC
)))))))))),<<<_____>>>,,,,,,]]]]]]------]-]],,[[[[[[,,,,<<<<<____>>>>>,<<<<<<<<-- CS
RF02541 810 cuguGgguaGgGGcGAAAggCCAAUCaAaCccgGaGAUAGCUgGUUCUCccCGAAAugccuUuAGgggcaGCgucgggcga 890
UGUGG:U GGGG:GAAAG:CCAAUCAAACC:GGAGAUAGCUGGUUCUCCCCGAAA::::UUUAGG::::GC:UCG:G:++
gi_545778205_gb_U000 4169406 UUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAU 4169486
********************************************************************************* PP
v v NC
<<<<<<<<<<<----<<<---<<<-<<<<---<<<<<<<____.>>>>>->>--->>>>->>>-->>->---->>>>>>>. CS
RF02541 891 ucccccccggcGGUAgaGCACuggaugggcuAgGgggccuaaa.ggccuACcaAacccaaccaAACuccGAAUgccgggg. 969
UC::C:CCGG GGUAGAGCACUG +U:GGC+AGGG:G:C + + G:C:UACCAA CC:A CAAACU CGAAU CCGG:G
gi_545778205_gb_U000 4169487 UCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAGGGGGUCAUCCcGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGa 4169567
***************************************99989************************************9 PP
NC
>>>-->>>>>>>>->,,,<<<<<<<<<<______>>>>>>>>>>,,,,<<<______>>>,,,((((-(((---(((---- CS
RF02541 970 gggaaagcccggcAGucAgaccgcgggcGaUAAgguccgcggucgAgAGGGaAAcAaCCCAGAcCgcCagcUAAGGuCCCu 1050
::G++A:C:CGG:AG+CA:AC::CGGG:G+UAA :UCCG::GU:+AGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCC+
gi_545778205_gb_U000 4169568 AUGUUAUCACGGGAGACACACGGCGGGUGCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCA 4169648
9******************************************************************************** PP
vv NC
--(-((((((-----------(((-((((((((((-------(((((,<<<--<<<_________>>>-->>><___><-- CS
RF02541 1051 AAgugcggGcUAAGUGggAAAGGcuGuggggccgCuaAgACAaCcaGGAgGUUGGCUUAGAAGCAGCCAUCcUuuAAaGAg 1131
AAGU:::GG:UAAGUGGGAAA:G:UGU:GG ::C AGACA:CCAGGA:GUUGGCUUAGAAGCAGCCAUC:UUUAAAGA+
gi_545778205_gb_U000 4169649 AAGUCAUGGUUAAGUGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAA 4169729
********************************************************************************* PP
vv NC
-<<______>>->,)))))---)))))))))))))--------------------))))))))))---)))))))<<<<<< CS
RF02541 1132 uGCGUAAuAGCUCACugGuCaAGcggccccgCgCCGAaAAUguaaCGGGGCUcAAgCccgccaCCGAAgcugcGggcucgc 1212
+GCGUAAUAGCUCACUGG:C+AG:: CC:GC:C:GAA AUGUAACGGGGCU AA:CC:::CACCGAAGCUGCGG:: C :
gi_545778205_gb_U000 4169730 AGCGUAAUAGCUCACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCU-AAACCAUGCACCGAAGCUGCGGCAGCGA 4169809
****************************************************.**************************** PP
vv vv NC
<<._____>>>>>>>>,,,,]]]]]]<-<<<<<<<.<<<------<<<<<<<<____>>>>>>>>--->>>>>>>>>>--> CS
RF02541 1213 gg.uuuaaccgcgagcGGUAGggGAGCguuccgcc.cgcgguGAAggcgccccGuaAggggcgccGGAgcgggcggaaGuG 1291
:G UU++ C:: G ::GGUAGGGGAGCGUUC:G ::C+G GAA:G: ::C:GU+A:G:: :C:GGAG:: C:GAAGUG
gi_545778205_gb_U000 4169810 CGcUUAUGCGUUGUUGGGUAGGGGAGCGUUCUGUAaGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUG 4169890
**888899*************************9999******************************************** PP
NC
,,,,,}}}}}}{{-----{{,,,,,<<<<<<_______>>>>>>{{{{,,,,{{{{,,{{,,,<<<<<<---<<_____>> CS
RF02541 1292 AgaAUGccGgcacgAGUAgCGAuAAgggggGUGAGAAuCcccccCGCCGaAAgcCcAAGGuUUCCuggguAAgGuUaaUCc 1372
GAAUGC:G:CA:+AGUA:CGAUAA:G:GGGUGA AA CCC:C:CGCCG AAG:CCAAGG UUCCUG :+AA:GUUAAUC:
gi_545778205_gb_U000 4169891 CGAAUGCUGACAUAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCG 4169971
********************************************************************************* PP
v NC
->>>>>>,,,,,,[[[[,<<---<<<-<-<<<____>>>->->>>--->>,,,<<<<<________>>>>>,,(((((((( CS
RF02541 1373 gcccaGGGUuAGuCGggaCCUAAGgcGaGGccGAaAggCGuAgcCGAUGGaaAgcgGGUuAAuAuUCCcgcaCcgcccggg 1453
G: CAGGGU AGUCG: +CCUAAG:CGAGGCCGAAAGGCGUAG:CGAUGG+AA:C:GGUUAAUAUUCC:G:AC::: :G::
gi_545778205_gb_U000 4169972 GGGCAGGGUGAGUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUU 4170052
********************************************************************************* PP
v NC
(((-----((--((((((---((((--(((--(((((<<<<<<__________>>>>>><<--<<<<---<<<.-<<<<<< CS
RF02541 1454 gccuuuaagcgacGgggcGACgcagaaggcuaggcgcgcgggcuguuGGaagugcccgcccaagcccuuaggc.ugggggg 1533
:C: GCGA:G:GG GACG:AGAAGGCUA:G::::C:GG: G+ GG++GU:CC:G:::AA:C::+UA:GC + :::::
gi_545778205_gb_U000 4170053 ACU-----GCGAAGGGGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCuGGUUUUC 4170128
***.....*****************************************************************99999999 PP
vv vv NC
<-<<_____>>>>>>>>>---.>>>--->>>>--->>,<<<<<<<____>>>>>>>,,)))))---)))---))))----- CS
RF02541 1534 cAGguAAAucCgccccccaau.gccgaggggcgaugggccgccgcuuaagcggcggaggcgccgaagccaugcugcCaaGA 1613
CAGG+AAAUCCG::::: A+ GC:GAG::G:GAU:: :C:CU+ +G:G: AG:::C:+A+GCC UGCU:CCA GA
gi_545778205_gb_U000 4170129 CAGGCAAAUCCGGAAAAUCAAgGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGA 4170209
9**********99999998888*********************************************************** PP
v v NC
---))))))--))---.)))))))))))]]]],,}},,,,,<<______>>,}}}},<<<<_____>>>>,,}}}},,{{{ CS
RF02541 1614 AAAgcccCgaagcuaa.ggccccgggcgccCGUACCguAAACCGACACAGGUgGgcagGgaGAGaAucCcaAGGCGcucGg 1693
AAA CC:C:AAGC++ :G:::C: ::: :CGUACC +AAACCGACACAGGUGG:CAGG:AGAGAAU:CCAAGGCGCU:G:
gi_545778205_gb_U000 4170210 AAAGCCUCUAAGCAUCaGGUAACAUCAAAUCGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGA 4170290
**************989**************************************************************** PP
vvvv NC
{----{{{{{{{{-{{{,,,,,,,,,,,,,,<<<<<---<<____>>---->>>>><<<<<<.........<<<<<<____ CS
RF02541 1694 GagAAcccuggucAAGgAACUCGGCAAAaUagcccCGUAccUUcGggAgAAGgggcgCCccc.........ccgggcguaa 1765
GAGAAC:C:GGU:AAGGAACU GGCAAAAU+G::CCGUA:CUUCGG:AGAAGG::C:C:::: ::GU
gi_545778205_gb_U000 4170291 GAGAACUCGGGUGAAGGAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUauguaggug----AGGUCC 4170367
**************************************************************998885443....333333 PP
vvvv NC
>>>>>>............>>>>>><___>,,,,,,,[[[[[[[[[,,<<<_________>>>,,<<<<<<<<<--<<<<__ CS
RF02541 1766 gcccgg............gggGGccGCAgagAauaGGcccgggCGACUGuUUAccAAAAaCACAggccucugCuAagucGu 1834
::C G ::::G:CG AGA A AG::::: :C:ACUGUUUA++AAAAACACAG::CU:UGC+AA::CG+
gi_545778205_gb_U000 4170368 CUCGCGgauggagcugaaAUCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGA 4170448
333333555555677778*************************************************************** PP
vv vv vv vv NC
__>>>>-->-->>>>>>>>,,((((,<<<--<<<<<<<--<<<---<<-<<<<<<<--<<____>>--->>>>>>>->>-- CS
RF02541 1835 AAgacgAuGUAuaggggcuGAcGCCUGCCCGGUgCcgGAAGGuUAAgggccgggGuuAgcGcaAgcgAAgCcccggAccgA 1915
AAG::GA+GUAUA:GG::UGACGCCUGCCCGGUGCCGGAAGGUUAA G :G:GUUAGCGCAAGCGAAGC:C: A GA
gi_545778205_gb_U000 4170449 AAGUGGACGUAUACGGUGUGACGCCUGCCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGA 4170529
********************************************************************************* PP
NC
->>>>>>>>-->>>>><<<<<<_______>>>>>><___>,,,,,<---------<<<<<<_____>>>>>>>,,,,,,,, CS
RF02541 1916 AgCCCcgGuAAACGGCGgCCGUAACUAUAACGGuCCUAAGGUAGCGAAAUUCCUUGuCGGgUAAGUuCCGaCCuGCACGAA 1996
AGCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAA
gi_545778205_gb_U000 4170530 AGCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAA 4170610
********************************************************************************* PP
NC
,)))),,,]]-]]]]]]],,,,}}}-}}}}}}}}-}}}}}}----}}},,,,<<<<<________>>>>>,,{{{{{{{{- CS
RF02541 1997 uGGCgUAACGAcccgggCgCUGuCUCgaccagggaCcCgGcGAAAguguAgUgccgGUgAAGAUGCcggcUaCcCgCggcu 2077
UGGCGUAA:GA: :::::GCUGUCUC:ACC:G:GAC:C:G:GAAA:UG+A U: C:GUGAAGAUGC:G :UACCC:CGGC+
gi_545778205_gb_U000 4170611 UGGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCA 4170691
********************************************************************************* PP
v NC
{{{-{{,,,,,,{{{{-{{{{{{{,((((---(((((((,,<<<<<<<<<<<<<<<<<<---------<<<<<--<<<--- CS
RF02541 2078 gGACgGAAAGACCCCGUGgAcCUUUACUguAgccuggcauUGgcccccggcgcggcccGUguAGgAUAgGuGGGAGgCuuu 2158
:GACGGAAAGACCCCGUG:ACCUUUACU:UAGC::G:CA UG::C::::: : :: ::GUGUAGGAUAGGUGGGAGGCUUU
gi_545778205_gb_U000 4170692 AGACGGAAAGACCCCGUGAACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUU 4170772
********************************************************************************* PP
v NC
---<<<<<<<<____>>>>>>>>--->>>------------>>>>>>>>>>>>>>>>>>>>>>>,,,<<<-<<<<<<____ CS
RF02541 2159 GAAgccggggcgcuAgccccggcGGAGcCaacguUGAaAUACCaCcCgggccgcgccgggggcCUAACccagccccguaAu 2239
GAA:::::G:CGC+AG:C:::::GGAGCC+AC UUGAAAUACCACCC:: :: : :::::G::CUAAC::+ :CCCGUAAU
gi_545778205_gb_U000 4170773 GAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAU 4170853
********************************************************************************* PP
NC
_>>>>>>>>>,,,,,)))))))----)))),,<<<<_____>>>><<<<<<___________>>>>>>{,[[,,,,((((( CS
RF02541 2240 ccggggcggGGACagugccagguGGGcAGUUUGaCuGGGGCgGuCgCCUCCuAAAgaGUAACGGAGGcGcgCaAAGGuucc 2320
CCGGG: ::GGACAGUG:C::GUGGG:AGUUUGACUGGGGCGGUC:CCUCCUAAAGAGUAACGGAGG:GC:C+AAGGUU::
gi_545778205_gb_U000 4170854 CCGGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGG 4170934
********************************************************************************* PP
NC
(<<-<<<<<<_______>>>>>>--->><<______>>,,,,)))))),,,,<<<<<<<<<______>>>>>>>>>,<<<_ CS
RF02541 2321 CUCAgcgcGguuGGaAAcCgcgcguaGAGcGcAAaggCAuAAGggagCuUgACuGcccGacugACAaguCgggCaGaggCG 2401
CU:A:C::G:U+GGA A:C::G:G +:AG:GCAA+G:CAUAAG::AGCUUGACUGC::G::UGAC ::C::GCAG+:GCG
gi_545778205_gb_U000 4170935 CUAAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCG 4171015
********************************************************************************* PP
NC
___>>>,]],,,,,,,,,,<<<<<<<-<<________>>>>>>>>>,,,,,},,,,,,}}}}}--}}}}}},,,,,,,,<< CS
RF02541 2402 AAAGccGGccuUAGUGAUCCggcGGcuccgagUGGaAgggCCgucGCUCAACGGAUAAAAGgUACcCCGGGGAUAACAGGC 2482
AAAGC:GG:C+UAGUGAUCCGG:GG:UC:GA+UGGAA:G:CC:UCGCUCAACGGAUAAAAGGUAC:CCGGGGAUAACAGGC
gi_545778205_gb_U000 4171016 AAAGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGC 4171096
********************************************************************************* PP
NC
<-<<<<<<<<---<<_______>>--->>>>>>>-->>>>,,,,,,,,,,(((((((((((,,<<-<<<<<<______>>> CS
RF02541 2483 ugAucccccCCAAGaGUuCAuAuCGACGggggggUUUgGCACCUCGAUGUCgGCUCauCgCAUCCUGGGgCuGgAGuAgGu 2563
UGAU:CC:CCCAAGAGUUCAUAUCGACGG:GG:GUUUGGCACCUCGAUGUCGGCUCAUC:CAUCCUGGGGCUG+AGUAGGU
gi_545778205_gb_U000 4171097 UGAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGU 4171177
********************************************************************************* PP
NC
>>>--->>,<<<<<_____>>>>>,,,,,)))))--)--))))-),,,,,<<<<<<<____>>>->>>>,,,,}}--}}}} CS
RF02541 2564 CCCAAGGGUucGGCUGUUCGCCgaUUAAAGcGguACGuGAGCuGGGUUcAGaaCGUCGUGAGACAGuuCGGUCCcUAUCcg 2644
CCCAAGGGU::GGCUGUUCGCC::UUAAAG:GGUACG+GAGCUGGGUU+AGAACGUCGUGAGACAGUUCGGUCCCUAUC:G
gi_545778205_gb_U000 4171178 CCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUG 4171258
********************************************************************************* PP
NC
}}}}}}},,,,((((((((--((((,,<<<<<<<_______________>>>>>>><<<<<<---<<<----<<<<<<<<< CS
RF02541 2645 ccGcGgGcGuaGGaggccUGAggGgauccgccccUAGUACGAGAGGACCggggcgggCggaCCucugGUGuacCgGuuGuc 2725
CCG:GGGCG +GGAG::CUGAGGGG +C::C:CCUAGUACGAGAGGACCGG:G::G:CG:A:C+CU:GUGU C:GGUUGUC
gi_545778205_gb_U000 4171259 CCGUGGGCGCUGGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUC 4171339
********************************************************************************* PP
NC
<<____>>>>>>-->>>>>---->>>->>>>>>,,<<<----<<<<<___________>>>>>---->>>,))))------ CS
RF02541 2726 gcGCcAgcggCauugCcGgGUAGCcauGuccGcaaggGAUAAcCGCUGAAaGCAUCUAAGCGgGAAgCccacCccAAGAua 2806
::GCCA::GGCA UGCC:GGUAGC:A+:U:CG:AA :GAUAA::GCUGAAAGCAUCUAAGC::GAA+C: CCCC AGAU
gi_545778205_gb_U000 4171340 AUGCCAAUGGCACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUG 4171420
********************************************************************************* PP
vv vv NC
)))))))),,<<<...._____>>>.,(--((((<<<<<_______>>>>>,,,,<<<<<<<<<<<--<--<<<<<____> CS
RF02541 2807 AggccuCCcucgg....uaaauccg.uuaAGgccccuggaAGAcuAccaggUuGAuaGgccggcgGUGcAAgcgcgGuAAc 2882
AG::CUCCCU::: UAA ::: U AAGG C:U:GAAGAC AC:A:GUUGAUAGGCCGG GUG:AA:CGC:G+ A:
gi_545778205_gb_U000 4171421 AGUUCUCCCUGACccuuUAAGGGUCcUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAU 4171501
***********99998655666999789***************************************************** PP
vv vv NC
>>>>>--->>>->>>>>->>>,,,))))-),,,}}}}}}}}:: CS
RF02541 2883 gcgcguAGCcgAccgguACuaAUaggcCgauaggcuugaccuu 2925
GCG:: AGC ACCGGUACUAAU CCG AGGCUU:ACCUU
gi_545778205_gb_U000 4171502 GCGUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU 4171544
******************************************* PP
>> |
