gi_545778205_gb_U000_142

cmsearch-Rfam

Family :

mir-21

Id:

RF00658

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00658

Description:

not description

Score:

27.2

E-value:

0.0034

From sequence:

3984239

To sequence:

3984302

Alignments:

                               v                  v                           v                 v NC
                               <<<<<<<<<<<<<<<--<<<<<-<<<<<-<<~~~~~~>>>>>>>->>>>>->>>>>>>>>>>>>>> CS
               RF00658       1 ugUCaGauAGCuuAuCAGACuGgUGUuGgCu*[12]*gGCaACAaCaGUCugUaaGCUguCuGAca 72     
                                :U:A::: GC:UA:  GA :G UG:::+::      :::::CA+C: UCU:UA:GC :::U:A: 
  gi_545778205_gb_U000 3984239 CCUUAUCCGGCCUACAUGAUCG-UGCAAAUU*[ 5]*AAUUGCAGCGUUCUGUAGGCUGGAUAAGA 3984302
                               **********************.**988765...3..56889************************ PP

RNAfold
>gi_545778205_gb_U000_142
ACGCCUUAUCCGGCCUACAUGAUCGUGCAAAUUCAAUAAAUUGCAGCGUU
CUGUAGGCUGGAUAAGAUGCG
.((((((((((((((((((.((.(((((((..........))))).)).)))))))))))))))))..))) (-35.20)

Length sequence

: 71

Length match:

62