gi_545778205_gb_U000_147

cmsearch-Rfam

Family :

mir-556

Id:

RF00969

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00969

Description:

not description

Score:

35.3

E-value:

0.00051

From sequence:

2464202

To sequence:

2464258

Alignments:

                                       v                                  v                NC
                               ::::::<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>::::::::::::: CS
               RF00969       1 GAUAGUaauaagaaaGaugagCu*[42]*aGcucauCuuuuuuauuauUauuUUuaaua 95     
                               GAUA  AA AA:AAAG:UGAG:        :CUCA:CUUU:UU UU+ U+U+UU +++A
  gi_545778205_gb_U000 2464202 GAUAACAACAAAAAAGGUGAGUU*[ 4]*GACUCACCUUUUUUAUUUGUUUCUUAUUCA 2464258
                               *********************96...8..69**************************** PP

RNAfold
>gi_545778205_gb_U000_147
UACUUGUGGUAAUUGAGGGAUAACAACAAAAAAGGUGAGUUUUGCGACUC
ACCUUUUUUAUUUGUUUCUUAUUCAGAAUCAAUAUCUUUUAAAU
......((((..((((((((.(((((.((((((((((((((....))))))))))))))..))))))))..))))).))))............. (-24.50)

Length sequence

: 94

Length match:

55