gi_545778205_gb_U000_149

cmsearch-Rfam

Family :

mir-73

Id:

RF00831

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00831

Description:

not description

Score:

27.3

E-value:

0.0002

From sequence:

610116

To sequence:

610206

Alignments:

                                         vv                  v                                       v            NC
                              ::::::::<<<<<---<<<<<<-<<<<<<<<<<<<<--<<--<<<<_____________>>>>>>-->>>>>->>>>>>>>-> CS
               RF00831      1 aaguaaaagUCcCucaccCgaCuGgaCUgCCacauCaaGCCaCAGCUAUcaauAAauuUGCUGGCAAGauguaGGcAGucCAG 83    
                              +   + A+G:   +C C::::C+GG:CU:C   :UC +GC A       ++AU  A+UU    GCAAGA:  + G:AG:CC G
  gi_545778205_gb_U000 610116 UGCCUGAUGCGCUACGCUUAUCAGGCCUACAUGGUCCUGCAAU------AUAUUGAAUU---GGCAAGAUUUUUGUAGGCCGG 610189
                              ****************************************664......3333333333...5******************** PP

                                       vv       NC
                              >>>>>---->>->>>:: CS
               RF00831     84 ucGggUgacGgaGAcca 100   
                              ::::G   +  A :CC 
  gi_545778205_gb_U000 610190 AUAAGGCGUUCACGCCG 610206
                              ****9999999****** PP

RNAfold
>gi_545778205_gb_U000_149
AAACUGCCUGAUGCGCUACGCUUAUCAGGCCUACAUGGUCCUGCAAUAUA
UUGAAUUGGCAAGAUUUUUGUAGGCCGGAUAAGGCGUUCACGCCGCAUCC
.........((((((..(((((((((.((((((((.((((.((((((.......))).))).))))..)))))))).))))).))))......)))))). (-37.20)

Length sequence

: 100

Length match:

89