gi_545778205_gb_U000_151

cmsearch-Rfam

Family :

NsiR1

Id:

RF02399

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

27.0

E-value:

0.0059

From sequence:

1028349

To sequence:

1028399

Alignments:

                                                                                        NC
                               :<~~~~~~>-----------<<<<<<<<<<<______>>>>>>>>>>>:::::::: CS
               RF02399       1 UG*[10]*CCUGAUaUaaaucCCCcaGccggcUaAcaccggCugGGGgUUUUUUUU 60     
                               UG      CC  AUA AAA+:CCCC:G::GGC AA+ACC::C:GGGG:UUU UU  
  gi_545778205_gb_U000 1028349 UG*[ 1]*CCAAAUAAAAAAUCCCCGGAAGGCAAAAACCUUCCGGGGAUUUGUUCA 1028399
                               *9...8..899****99*************************************** PP

>>

RNAfold
>gi_545778205_gb_U000_151
GGCCUGGCCAAAUAAAAAAUCCCCGGAAGGCAAAAACCUUCCGGGGAUUU
GUUCAGGGAU
..(((((.(((.......((((((((((((......))))))))))))))).)))))... (-30.30)

Length sequence

: 60

Length match:

49