gi_545778205_gb_U000_152

cmsearch-Rfam

Family :

NsiR1

Id:

RF02399

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

32.3

E-value:

0.00029

From sequence:

1028406

To sequence:

1028356

Alignments:

                                                                                        NC
                               :<~~~~~~>-----------<<<<<<<<<<<______>>>>>>>>>>>:::::::: CS
               RF02399       1 UG*[10]*CCUGAUaUaaaucCCCcaGccggcUaAcaccggCugGGGgUUUUUUUU 60     
                               U:      :CUGA    AA+:CCCC:G::GG U    CC::C:GGGG:UUUUUU U
  gi_545778205_gb_U000 1028406 UA*[ 3]*CCUGAAC--AAAUCCCCGGAAGGUUUUUGCCUUCCGGGGAUUUUUUAU 1028356
                               *6...7..5****99..99************************************* PP

>>

RNAfold
>gi_545778205_gb_U000_152
CCAAAUAAAAAAUCCCCGGAAGGCAAAAACCUUCCGGGGAUUUGUUCAGG
GAUUAGUUAC
((.......((((((((((((((......))))))))))))))......))......... (-28.00)

Length sequence

: 60

Length match:

49