gi_545778205_gb_U000_153

cmsearch-Rfam

Family :

NsiR1

Id:

RF02399

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

26.9

E-value:

0.0064

From sequence:

3158873

To sequence:

3158928

Alignments:

                                vvv      vvv                                                 NC
                               :<<<______>>>------.-----<<<<<<<<<<<______>>>>>>>>>>>:::::::: CS
               RF02399       1 UGGUAGAUGCACCCUGAUa.UaaaucCCCcaGccggcUaAcaccggCugGGGgUUUUUUUU 60     
                               U     A GCA + UGAUA  AAA+:CCCC:G:: : U  CA: ::C:GGGG:U UUUUUU
  gi_545778205_gb_U000 3158873 U-----ACGCAGAAUGAUAaAAAAAUCCCCGGUAGCGUGUCAGUUGCCGGGGAUAUUUUUU 3158928
                               *.....8899889******888899************************************ PP

RNAfold
>gi_545778205_gb_U000_153
GUACGCAGAAUGAUAAAAAAAUCCCCGGUAGCGUGUCAGUUGCCGGGGAU
AUUUUUUAA
.............(((((((((((((((((((......)))))))))))).))))))). (-26.00)

Length sequence

: 59

Length match:

54