gi_545778205_gb_U000_154

cmsearch-Rfam

Family :

nuoG

Id:

RF01748

Type:

Cis-reg;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

45.5

E-value:

7.8e-08

From sequence:

2400215

To sequence:

2400173

Alignments:

                                              v                 v           NC
                               :::::::::::::::<<<<<<<_____>>>>>>>:::::::::: CS
               RF01748       1 GAAUUUUUGAUUAACgCUuGUcguagGgACaAGcCAcUUGGAAG 44     
                               GAAUU U GAUUAAC CU::::+U+ G::::AG  A++UGGAAG
  gi_545778205_gb_U000 2400215 GAAUU-UCGAUUAACGCUCAGUCUCUGACUGAGAAAACUGGAAG 2400173
                               *****.*********9999999999999999999999******* PP

RNAfold
>gi_545778205_gb_U000_154
CUUCCAGUUUUCUCAGUCAGAGACUGAGCGUUAAUCGAAAUUCG
...........(((((((...)))))))................ ( -9.30)

Length sequence

: 44

Length match:

41