cmsearch-Rfam

Family :

Id:

Type:

Taxonomy:

Ontology:

Description:

Score:

E-value:

From sequence:

To sequence:

Alignments:

                                                                                                                 NC
                               :::::::::::::::::::::::::::::::::<<<<<<<<<______>>>>>>>>>------------------------ CS
               RF01770       1 agcuauuuuuaguuuaucAGGGUCCAGuaacAuAAAgCCCCGAuUUaUCGGGGcUUUUUGUUAUcUgAauuuuugcuuugu 81     
                                GC  UU++U+G U A++A      AGU+++A+AAA:CCCCG U    CGGGG:UUUUUGU   +  A++UU UGC U++U
  gi_545778205_gb_U000 2282793 CGCGCUUAAUUGCUGAAUA------AGUUGUAAAAAACCCCGCUCCGGCGGGGUUUUUUGUAUCUGCAGAUUAUGCCUGAU 2282867
                               **************99987......899**************999888************877666777777888888888 PP

                                                        NC
                               ---------<~~~~~~>::::::: CS
               RF01770      82 auuuuaAuUG*[12]*CUUUUUUU 111    
                               ++   +AUUG      CU UUUUU
  gi_545778205_gb_U000 2282868 UACGGUAUUG*[ 0]*CUAUUUUU 2282885
                               7777777766......7******* PP

RNAfold

Length sequence

Length match: