gi_545778205_gb_U000_188 |
cmsearch-Rfam |
Family : rimP |
Id: RF01770 |
Type: Gene; |
Taxonomy: Eukaryota; Bacteria; | Ontology: Not found |
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Description: not description |
Score: 98.9 |
E-value: 1.8e-16 |
From sequence: 3318124 |
To sequence: 3318024 |
Alignments: NC :::::::::::::::::::::::::::::::::<<<<<<<<<______>>>>>>>>>------------------------ CS RF01770 1 agcuauuuuuaguuuaucAGGGUCCAGuaacAuAAAgCCCCGAuUUaUCGGGGcUUUUUGUUAUcUgAauuuuugcuuugu 81 ++C + + UU ++U+++AGGGU CAGU+A+AUAAA:CCCCGAUUUAUCGGGG:UUUUUGUUAUCUGA +U+ gi_545778205_gb_U000 3318124 GACCGCAGUUGCGGUUAUAGGGUUCAGUUAUAUAAAGCCCCGAUUUAUCGGGGUUUUUUGUUAUCUGA---------CUAC 3318053 ********************************************************************.........**** PP
NC ---------<<<<______>>>>::::::: CS RF01770 82 auuuuaAuUGGGCUaUuaaGCCCUUUUUUU 111 A ++UAA+UGGGCU UUA GCCCUUUUUUU gi_545778205_gb_U000 3318052 AGAAUAACUGGGCU-UUAGGCCCUUUUUUU 3318024 **************.6666*********** PP
>> |
RNAfold |
>gi_545778205_gb_U000_188 ACAUAAAAAAAGGGCCUAAAGCCCAGUUAUUCUGUAGUCAGAUAACAAAA AACCCCGAUAAAUCGGGGCUUUAUAUAACUGAACCCUAUAACCGCAACUG CGGUCUGGAG ...........((((.....)))).(((((.(((....))))))))......((((((....))))))................((....(((((....)))))..)).. (-30.70) |
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Length sequence: 110 |
Length match: 99 |