gi_545778205_gb_U000_198

cmsearch-Rfam

Family :

rnk_pseudo

Id:

RF01772

Type:

Gene;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

30.1

E-value:

0.006

From sequence:

2062307

To sequence:

2062377

Alignments:

                                                                                                           NC
                               :<<<<<----~~~~~~>>>>>------------------<<<<<<<<<<<<____>>>>>>>>>>>>:::::::: CS
               RF01772       1 cgccgcugGC*[39]*gcggcgacuuagugagggcucggaAAAcCCCgcCcUUCggGgcGGGgUUUuGCUUUuUU 108    
                               C:C:G:U  C      :C:G: A++  + G     U   AAAA: CC::C:UUC :G::GG :UUUUGCUUU U 
  gi_545778205_gb_U000 2062307 CACUGGU-UC*[ 4]*CCAGUCAGAGGA-GCCAAAUUCAAAAAAGCCUGCUUUCUAGCAGGCUUUUUGCUUUCUA 2062377
                               ****998.45...6..899995554444.4444678999************************************ PP

>>

RNAfold
>gi_545778205_gb_U000_198
GACUGUUAAUCCGUAUGUCACUGGUUCGAGUCCAGUCAGAGGAGCCAAAU
UCAAAAAAGCCUGCUUUCUAGCAGGCUUUUUGCUUUCUAAUUACCAACGC
UCUUAAAA
(((.............)))(((((.......)))))...((((((........((((((((((((....)))))))))))).................)))))).... (-28.60)

Length sequence

: 108

Length match:

69