gi_545778205_gb_U000_21

cmsearch-Rfam

Family :

Atu_C8

Id:

RF02502

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

26.3

E-value:

0.0075

From sequence:

209524

To sequence:

209634

Alignments:

                                                          v                                            v     NC
                              ::::::<-<________________>->[[[[~~~~~~,,,,<-<<<<<<<____>>>>>>>>,,,,,,,]]]]:::: CS
               RF02502      1 gAaaAacacaAugaUUaUUcUuGUggUgggcc*[50]*aaAaaCAGGccCCUuaaGGggCCUuUUUUuaUggccuaaA 122   
                                ++AA:A:  + A  AU  U+GU :U: GC:      +AAAA :GG:C CUU+ G G:CC:UUUUUUAU:GC     
  gi_545778205_gb_U000 209524 ACUGAAGAUUUAAAAAAUCGUCGUUAUCAGCG*[39]*GAAAAAGGGUCACUUCGGUGGCCCUUUUUUAUCGCCACGG 209634
                              ********************************...9..555566********************************** PP

RNAfold
>gi_545778205_gb_U000_21
UAAGCACUGAAGAUUUAAAAAAUCGUCGUUAUCAGCGCCUGAUGAGCUAC
GGUUACGCGUAAUUCGCAAAAGUUCUGAAAAAGGGUCACUUCGGUGGCCC
UUUUUUAUCGCCACGGUUUGAG
.....((((...........((((((.((((((((...))))))).).))))))..(((.....)))....((..((((((((((((((....))))))))))))))..))..))))..... (-35.60)

Length sequence

: 122

Length match:

109