Alignments: v v v v v v v v v v v v NC
::::::(--((((-((((((((((((,,,,,,,,,,,,,,,,,,,<<<<<<<--<<<<------<<<<<___>>>>>---> CS
RF02391 1 UGAAuGcaGgaacUuuucuugCugggAUUUugAUuUCUUCaCCaGUuugcgGGUUaCGgCCuuUaCGuGCaGCaCGuUcaC 81
+AAUGC G :AC U :: : C : :AUUUUGAUUUCUU ACC GU :: GGGUU:::GCC +U CG: CAG :CG U +:
gi_545778205_gb_U000 4200518 CAAAUGCCGGUACGUUAGCUGCGGCAAUUUUGAUUUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGCUCAGCGCGGUGGU 4200438
********************************************************************************* PP
v v vv vv v v v v v v NC
>>>>>>>>>>,,,,,,<<<<________________>>>>,)))-.-...)))))))))))))--)::::: CS
RF02391 82 GuACugcaaAggUaCCgAaaCCgAucAaUUGaACuUuuUcacccU.U...aGcaagaaaguucuugauuga 148
::ACU :: AGGUACCGA CC+A+CA+UUG+AC UC : :U U G : :: AGU: UUG
gi_545778205_gb_U000 4200437 UCACUUUGAAGGUACCGAAACCAACCAGUUGUACAGCAUCGCCUUcUuucAGAGACUCAGUAAUUGCAGCC 4200367
**********************************9988887544322111444558888************ PP
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