gi_545778205_gb_U000_250

cmsearch-Rfam

Family :

snoR442

Id:

RF01232

Type:

Gene; snRNA; snoRNA; CD-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01232

Description:

not description

Score:

24.9

E-value:

0.0052

From sequence:

4292274

To sequence:

4292312

Alignments:

                                                                               NC
                               :::::<<<_____>>><<<<<_.______>>>>>::::::::::::: CS
               RF01232       1 uGCAAgCCUGUUGGGcGUGAuU.cuGCUUgUCAUAGUUACUCUGAuc 46     
                               UGC A      UG   GU  :U +UGCU :  AUAGUUACUCUGAU 
  gi_545778205_gb_U000 4292274 UGCCA-----CUG---GUCGCUgUUGCUGGCGAUAGUUACUCUGAUG 4292312
                               *****.....677...******************************* PP

RNAfold
>gi_545778205_gb_U000_250
UUUUGCCACUGGUCGCUGUUGCUGGCGAUAGUUACUCUGAUGCUGU
.......((((.(((((......))))))))).............. ( -8.30)

Length sequence

: 46

Length match:

37