gi_545778205_gb_U000_272

cmsearch-Rfam

Family :

sroB

Id:

RF00368

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

83.0

E-value:

3.1e-12

From sequence:

507204

To sequence:

507287

Alignments:

                                                         v        v                                               NC
                              ::::::<<<<<____>>>>>,,,,,,,<<___.._>>-------------------<<<<<<<<<____>>>>>>>>>::::: CS
               RF00368      1 aaAcagggcgcauaAgcgccuaguAuauuaAu..AaaaaugAAAUUCCUCUUUGACuGGCCgaUAGcgAUAucGGCCaUUUUU 81    
                              A AC+G::::: UAA::::: +G+AUA UAAU  AA AAUGAAAUUCCUCUUUGAC:GGCC:AUAGCGAUAU:GGCC:UUUUU
  gi_545778205_gb_U000 507204 ACACCGUCGCU-UAAAGUGACGGCAUAAUAAUaaAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUU 507285
                              ***********.99****************997778899******************************************** PP

                                 NC
                              :: CS
               RF00368     82 UU 83    
                              UU
  gi_545778205_gb_U000 507286 UU 507287
                              ** PP

RNAfold
>gi_545778205_gb_U000_272
CACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUU
UGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU
..((((((((...))))))))..................................((((((((....))))))))........ (-24.50)

Length sequence

: 83

Length match:

82