gi_545778205_gb_U000_316

cmsearch-Rfam

Family :

STnc370

Id:

RF02064

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

57.0

E-value:

1.6e-07

From sequence:

4060215

To sequence:

4060283

Alignments:

                                     vvv        vvv                                                      NC
                               :::<<<<<<________>>>>>>---------------<<<<<<<<<<_.._____>>>>>>>>>>::::::: CS
               RF02064       1 AAUuAuuaGCGAAUcaaCuaaUacUaUUUauGUUAUAAAAAAACCUGCC..CGAaAGCAGGUUUUUuUUUAuU 71     
                               A  :A:+++CGA+U A+   :U: U UUU++GU+AUA AAAAACCUGCC  CGA  GCAGGUUUUUUUUU   
  gi_545778205_gb_U000 4060215 ACCGAAAGACGAUUAAU---UUCGUUUUUUAGUCAUA-AAAAACCUGCCagCGAUGGCAGGUUUUUUUUUGCC 4060283
                               *****************...****************7.8899******************************* PP

RNAfold

>gi_545778205_gb_U000_316
ACCGAAAGACGAUUAAUUUCGUUUUUUAGUCAUAAAAAACCUGCCAGCGA
UGGCAGGUUUUUUUUUGCCU
((.(((((((((......))))))))).))((.(((((((((((((....)))))))))))))..))... (-27.90)

Length sequence

: 70

Length match:

67