gi_545778205_gb_U000_318

cmsearch-Rfam

Family :

STnc40

Id:

RF02057

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

84.3

E-value:

7e-16

From sequence:

110960

To sequence:

111029

Alignments:

                                                                                                     NC
                              :<<<-<<____>>--->>>-----------------------<<<<<<<<<<<____>>>>>>>>>>>:: CS
               RF02057      1 gcagUgCCAuGGccGucugaacUAAgaacUgAuuaaUaaAaaAAAAGGCGCAGgauUCUGCGCCUUUUUU 70    
                              GCAGUGCCAUGGCCG+CUG A+UAA+A CU+A U +U+AA +AAAAGGCGCAGGAUUCUGCGCCUUUUUU
  gi_545778205_gb_U000 110960 GCAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGCAGGAUUCUGCGCCUUUUUU 111029
                              ********************************************************************** PP

>>

RNAfold

>gi_545778205_gb_U000_318
CAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGC
AGGAUUCUGCGCCUUUUUU
(((.((.......)))))(((((.........)))))....(((((((((((....))))))))))).. (-21.60)

Length sequence

: 69

Length match:

68