gi_545778205_gb_U000_32

cmsearch-Rfam

Family :

Chlorobi-1

Id:

RF01696

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

24.8

E-value:

0.00036

From sequence:

4472422

To sequence:

4472478

Alignments:

                                                                v        v                             NC
                               ::::<<<<<<<<____>>>>>>>><<<<<<<<<<________>>>>>>>>>>:....:::::::::::::: CS
               RF01696       1 gAAAuaCCuCACGCCaGUGaGGuaGaGCAGguGuAAUGGGGGaCacCUGCuCA....aaaaAAAAGCGGCc 67     
                               +AAA::CC:C CG   G G:GG::G:        AAUGGG G        :CA    +AA AAAA CGGC 
  gi_545778205_gb_U000 4472422 AAAAAGCCCCUCGAUUGAGGGGCUGG-------GAAUGGGUGA-------UCAacggGAAGAAAAACGGCA 4472478
                               ************************96.......4899999983.......5555669************** PP

RNAfold
>gi_545778205_gb_U000_32
CAAAAAAAAGCCCCUCGAUUGAGGGGCUGGGAAUGGGUGAUCAACGGGAA
GAAAAACGGCAGGCCA
........((((((((....)))))))).((..((.((..((........))...))..))..)). (-20.20)

Length sequence

: 66

Length match:

55