gi_545778205_gb_U000_325

cmsearch-Rfam

Family :

STnc480

Id:

RF02068

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

86.9

E-value:

1.8e-14

From sequence:

543188

To sequence:

543254

Alignments:

                                                                                                       NC
                              :::::::::::<<<<<<<<____>>>>>>>>::::::::::::::::::::::::::::::::::::::::: CS
               RF02068      1 guAUAAAAAAaGCCACGGuucucaCCGUGGCAAAAUCCAACAUAGCUAAAuaAAAAAuAaUCAGGaGaGugG 72    
                               UA+AAAAAAAGCCACGGU++++ACCGUGGCAAAAUCCAACAUAGCUA     AAAAUAAUCAGG+GAGUGG
  gi_545778205_gb_U000 543188 UUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUA-----AAAAUAAUCAGGCGAGUGG 543254
                              ************************************************.....******************* PP

RNAfold
>gi_545778205_gb_U000_325
UGUUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUA
AAAAUAAUCAGGCGAGUGGUAU
.............((((((((....)))))))).....(((.....(((...........)))...)))... (-18.50)

Length sequence

: 72

Length match:

65