gi_545778205_gb_U000_326

cmsearch-Rfam

Family :

STnc50

Id:

RF02059

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

31.1

E-value:

0.0044

From sequence:

659258

To sequence:

659185

Alignments:

                                  vv                    vv                                                        NC
                              ::::<<<<________________>>>>-------------------------<<<<<<<<____>>>>>>>>:::::::::: CS
               RF02059      1 UUUCGuuaUCCUUCGCCAUCUAUUugaCACAUCUGaUUUauCAuaCAUAAAAAaaGCGGCuGuAAaGCCGCuuGUUuUGUAUu 83    
                              UU  GU:AUCCU     A  UA  U:  ACAUCUG  U        AUAAAAAA::CG::U U  A::CG::U UUUUGUAU+
  gi_545778205_gb_U000 659258 UUAAGUAAUCCUGUAAUAAUUAC-UU--ACAUCUGUCU-------GAUAAAAAACCCGCUUUUUGAAGCGGGUUUUUUGUAUC 659186
                              ****9999999976655555444.44..5567887655.......5899********************************** PP

                                NC
                              : CS
               RF02059     84 G 84    
                              G
  gi_545778205_gb_U000 659185 G 659185
                              * PP

RNAfold
>gi_545778205_gb_U000_326
UGUUCGAUACAAAAAACCCGCUUCAAAAAGCGGGUUUUUUAUCAGACAGA
UGUAAGUAAUUAUUACAGGAUUACUUAACUUCC
((((.((((..((((((((((((....)))))))))))))))).))))((.((((((((((.......)))))))).)).)). (-28.50)

Length sequence

: 83

Length match:

72