gi_545778205_gb_U000_33

cmsearch-Rfam

Family :

ClpQY_promoter

Id:

RF02401

Type:

Cis-reg;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

GO:0048255 mRNA stabilization

Description:

not description

Score:

62.5

E-value:

5.6e-12

From sequence:

4122342

To sequence:

4122285

Alignments:

                                                                                          NC
                               <<<<<<<<____>>>>>>>>:::::::::::::::::::::::::::::::::::::: CS
               RF02401       1 CCCCGcacgcuagugCGGGGCccuUaUUCcGcaUcUGcAACcAAGGGGUCUGCUCGUG 58     
                               CCCCG:AC +U GU:CGGGG ++ UA UC+G+AU+ G+AACCAAGGGGUC GCUCGUG
  gi_545778205_gb_U000 4122342 CCCCGUACUUUUGUACGGGGUUUGUACUCUGUAUUCGUAACCAAGGGGUCAGCUCGUG 4122285
                               ********8888********************************************** PP

RNAfold
>gi_545778205_gb_U000_33
ACGAGCUGACCCCUUGGUUACGAAUACAGAGUACAAACCCCGUACAAAAG
UACGGGG
.((((((((....)))))).))...............((((((((....)))))))) (-17.40)

Length sequence

: 57

Length match:

56