gi_545778205_gb_U000_333 |
cmsearch-Rfam |
Family : StyR-44 |
Id: RF01830 |
Type: Gene; |
Taxonomy: Eukaryota; Bacteria; Archaea; | Ontology: Not found |
![](http://rfam.xfam.org/family/RF01830/image/cons) |
Description: not description |
Score: 105.0 |
E-value: 1.5e-17 |
From sequence: 2729291 |
To sequence: 2729192 |
Alignments: NC :::::::::::::::::::<<-<<<<<<<----<<<-<<<<<<<____>>>>>>>>>>--------->>>>>>>>>----< CS RF01830 1 CUUUAAaAAUCUGGAuCAAGCUGaaaaUuGAAACgcugcAcagcuAAagcugUgcgcGAGUCUCUCAaAuuuuCGCAAcac 81 CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAAC:CUG:ACA:: AAA::UGU:CG:GAGUCUCUCAAAUUUUCGCAAC+C gi_545778205_gb_U000 2729291 CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACUC 2729211 ******************************************************************************986 PP
vvv vvv NC .<<-<<<<__________>>>>->>>: CS RF01830 82 .gaaGauguaUcAuGAAAcauCUucgG 107 GAAG UGAAACAUCUUCGG gi_545778205_gb_U000 2729210 uGAAG--------UGAAACAUCUUCGG 2729192 6****........9************* PP
|
RNAfold |
>gi_545778205_gb_U000_333 AACCCGAAGAUGUUUCACUUCAGAGUUGCGAAAAUUUGAGAGACUCACGA ACAACUUUCAUUGUUCAGUGUUUCAAUUUUCAGCUUGAUCCAGAUUUUUA AAGAGCA ((((.((((........)))).).)))..(((((((.((((.(((...((((((......))))))))).))))))))))).((((................)))). (-20.50) |
![](data:image/png;base64,R0lGODlhAQABAAD/ACwAAAAAAQABAAACADs=) |
Length sequence: 107 |
Length match: 98 |