gi_545778205_gb_U000_344

cmsearch-Rfam

Family :

sX9

Id:

RF02228

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

29.5

E-value:

0.004

From sequence:

2689602

To sequence:

2689536

Alignments:

                                                                                      NC
                               :<<<<<_____>>>>>,,,<<<<-<____>->>>>-----------~~~~~~:: CS
               RF02228       1 AUGuaCCACuCGuaCACUccGGuUCCuccGCgCCguCCGcaCCCAc*[28]*CC 76     
                               A:GUAC A   GUAC:CUCC:GUU CUCC CGC:GUCC+++ CCA+      CC
  gi_545778205_gb_U000 2689602 ACGUACGAUAUGUACGCUCCGGUUUCUCCGCGCUGUCCAUGUCCAG*[19]*CC 2689536
                               *****************************************99986...5..** PP

>>

RNAfold
>gi_545778205_gb_U000_344
AGUGGGCGUAAUUGUUGCAGACAGUCUGGACAUGGACAGCGCGGAGAAAC
CGGAGCGUACAUAUCGUACGUGAAGA
.....((((...((((.((((...))))))))...)).)).(((.....)))..((((((.....))))))..... (-17.00)

Length sequence

: 76

Length match:

65