gi_545778205_gb_U000_358

cmsearch-Rfam

Family :

tpke11

Id:

RF02031

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

69.5

E-value:

1e-14

From sequence:

14090

To sequence:

14167

Alignments:

                                              v                                 v                            NC
                             ::<<<_________>>><<<<<<<<<-<<<<____...>>>>->>>>>>>>>::::::::::::::::::::::::::: CS
               RF02031     1 aAcgGuUaaUuaaACcgGCACGGGCGUaGAGGuaa...CUCuaCGCCCGUGCacGCAUGUUAAGGGcAaaaaAAAaaag 76   
                             AAC:G+UAAUUA+AC:G CACGGGCG AG:GG+A+   C:CU CGCCCGUG A++CAU  UA GGGCAA+++AAAAAAG
  gi_545778205_gb_U000 14090 AACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUuucCUCUCCGCCCGUGCAUUCAU-CUAGGGGCAAUUUAAAAAAG 14167
                             ********************************555568********************.******************** PP

RNAfold
>gi_545778205_gb_U000_358
ACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUUUCCUCUCCGCCCGUG
CAUUCAUCUAGGGGCAAUUUAAAAAAG
.(((.........))).((((((((.((((((...)))))).))))))))........................... (-26.00)

Length sequence

: 77

Length match:

76