gi_545778205_gb_U000_457

cmsearch-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

28.0

E-value:

0.004

From sequence:

236929

To sequence:

237005

Alignments:

                                             v       v    v                 v                                   NC
                              (((((((((,,<<<<<<.____>>>>>><<<<<<_______>>>>>>,~~~~~~,,<<<<_______>>>>.))))))))) CS
               RF01852      1 Gggggggcgaucggccc.UGGUgggccguccGGgCUUCAAAcCCggaG*[18]*gGggGGUUCGAUUCCcc.cgccccccC 91    
                              G:GG::::G   ::C    GGU  G::  CC:G:CU   A :C:GG G       G:GGGUUCGA UCCC: C::::CC:C
  gi_545778205_gb_U000 236929 GCGGAGCGGUAGUUCAGuCGGUUAGAAUACCUGCCUGUCACGCAGGGG*[ 2]*CGCGGGUUCGAGUCCCGuCCGUUCCGC 237005
                              ****************868*****************88888*****99...4..57************************* PP

>>

RNAfold
>gi_545778205_gb_U000_457
CACAACGCGGAGCGGUAGUUCAGUCGGUUAGAAUACCUGCCUGUCACGCA
GGGGGUCGCGGGUUCGAGUCCCGUCCGUUCCGCCACUAUU
......(((((((((........((.....))..((((.(((((...))))))))).(((((.......))))))))))))))....... (-33.10)

Length sequence

: 90

Length match:

75