gi_545778205_gb_U000_465

cmsearch-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

26.8

E-value:

0.0081

From sequence:

2947608

To sequence:

2947678

Alignments:

                                     vv    v   v    v   v v                 v                         vv       NC
                               (((((((((,,<<<<<<____>>>>>><<<<<<_______>>>>>>,~~~~~~,,<<<<_______>>>>))))))))) CS
               RF01852       1 GggggggcgaucggcccUGGUgggccguccGGgCUUCAAAcCCggaG*[18]*gGggGGUUCGAUUCCcccgccccccC 91     
                               G:GGGG+ G  : ::C UGGU G:: : :CGGGCU   AACCCG: G       G :GGUUC+A UCC: C  CCCC:C
  gi_545778205_gb_U000 2947608 GCGGGGUGG-AGCAGCCUGGUAGCU-CGUCGGGCUCAUAACCCGAAG*[ 2]*CGUCGGUUCAAAUCCGGC--CCCCGC 2947678
                               *****9666.57788899***8887.899******999*******99...4..57***************8..79**** PP

RNAfold
>gi_545778205_gb_U000_465
UACGGUGACGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCC
GAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAACCAAUUAU
...(((...((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))).)))...... (-31.90)

Length sequence

: 90

Length match:

69