gi_545778205_gb_U000_466

cmsearch-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

33.6

E-value:

0.00014

From sequence:

2999058

To sequence:

2998987

Alignments:

                                       v      vv    vv    v                 v                        v         NC
                               (((((((((,,<<<<<<____>>>>>><<<<<<_______>>>>>>,~~~~~~,,<<<<_______>>>>))))))))) CS
               RF01852       1 GggggggcgaucggcccUGGUgggccguccGGgCUUCAAAcCCggaG*[18]*gGggGGUUCGAUUCCcccgccccccC 91     
                               :G:GGG::   :::C +UGGU  G::: :::G: U C AA:C:::         G:GGGUUCGAUUCCC: ::CCC:C:
  gi_545778205_gb_U000 2999058 AGCGGGCGU-AGUUCAAUGGU-AGAACGAGAGCUUCCCAAGCUCUAU*[ 1]*CGAGGGUUCGAUUCCCUUCGCCCGCU 2998987
                               *******99.7*********5.9**********************98...4..68************************ PP

>>

RNAfold
>gi_545778205_gb_U000_466
AUAAAUUGGAGCGGGCGAAGGGAAUCGAACCCUCGUAUAGAGCUUGGGAA
GCUCUCGUUCUACCAUUGAACUACGCCCGCUUCGAGAUGCG
.....((((((((((((.((((.......)))).....(((((((...))))))).((((.......))))..))))))))))))...... (-36.00)

Length sequence

: 91

Length match:

70