gi_545778205_gb_U000_475

cmsearch-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

28.3

E-value:

0.0032

From sequence:

4362627

To sequence:

4362554

Alignments:

                                              v      v    v                 v                                    NC
                               (((((((((,,<<<<<<____>>>>>><<<<<<_______>>>>>>,<~~~~~~>,,<<<<_______>>>>))))))))) CS
               RF01852       1 GggggggcgaucggcccUGGUgggccguccGGgCUUCAAAcCCggaGg*[16]*cgGggGGUUCGAUUCCcccgccccccC 91     
                                G:::GG:   :::C  U G   G::: ::GG: U  AAA:CC::  G      C  : GGUUCGAUUCC : :CC:::C 
  gi_545778205_gb_U000 4362627 UGCCCGGAU-AGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUG*[ 1]*CC-UUGGUUCGAUUCCGAGUCCGGGCA 4362554
                               *********.688887655555688888999999999999****9884...6..46.************************ PP

>>

RNAfold
>gi_545778205_gb_U000_475
GAAUUUGGUGCCCGGACUCGGAAUCGAACCAAGGACACGGGGAUUUUCAA
UCCCCUGCUCUACCGACUGAGCUAUCCGGGCAACGGGGCGC
...((((.(((((((((((((..(((.....(((.((.(((((((...))))))))).)))..))))))))...)))))))).)))).... (-34.40)

Length sequence

: 91

Length match:

72