gi_545778205_gb_U000_56

cmsearch-Rfam

Family :

DicF

Id:

RF00039

Type:

Gene; antisense;

Taxonomy:

Bacteria;

Ontology:

GO:0003729 mRNA binding

Description:

DicF RNA is an antisense inhibitor of cell division gene ftsZ [1].

Score:

75.8

E-value:

6.6e-17

From sequence:

1649383

To sequence:

1649434

Alignments:

                                                                                    NC
                               ::::::::::::::<<<<<<<-<<<<___________>>>>--->>>>>>>: CS
               RF00039       1 UUuuuGUGauaUUUGGCGGuAUCAGuUUUACUCcGUuaCUGaUcUgCCGCCC 52     
                               UU+U+GUGA++UUUGGCGGUAUCAGUUUUACUCCGU+ACUG+UCUGCCGCCC
  gi_545778205_gb_U000 1649383 UUCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCCC 1649434
                               **************************************************** PP

>>

RNAfold
>gi_545778205_gb_U000_56
UCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCC
C
.............(((((((.(((((.........)))))...))))))). (-16.10)

Length sequence

: 51

Length match:

50