gi_545778205_gb_U000_70

cmsearch-Rfam

Family :

greA

Id:

RF01769

Type:

Gene;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

Not found

Description:

not description

Score:

127.1

E-value:

1.7e-24

From sequence:

3328932

To sequence:

3328811

Alignments:

                                                                                                                 NC
                               <<<<<----<<--<<_____________>>--->>>>>>><<____>>,,,,,,,,<<<<_______>>>>,,,,,,,,,, CS
               RF01769       1 GuCAUACUACGGuGCAAcGcgguaaAAAGUAAACGAUGaCCcuuaagGAACUcuagGgUaAAAUacauAuCAAAAUGcAAA 81     
                               GUCAUACUACGG+GCAACGC +UA+AAAGUAAACGAUGACCCUU +GGAACU++AGGGUAAAAU+  UAUCAAAAUG   A
  gi_545778205_gb_U000 3328932 GUCAUACUACGGCGCAACGCCCUAUAAAGUAAACGAUGACCCUUCGGGAACUUCAGGGUAAAAUGACUAUCAAAAUG-UGA 3328853
                               *****************************************************************************.99* PP

                                                                           NC
                               ,,,,,,<<<<<<<<<<<________>>>>>>>>>>>::::::: CS
               RF01769      82 AUUGaucccgacccgggaaUuuuuucccgggucggguUuUUUU 124    
                               AUUG++:C:GACC:GGGA+U U+U CCC:GGUC:G:+UUUUUU
  gi_545778205_gb_U000 3328852 AUUGUAGCUGACCUGGGACU-UGUACCCGGGUCGGUAUUUUUU 3328811
                               *******************9.6999****************** PP

RNAfold
>gi_545778205_gb_U000_70
AAAAAAUACCGACCCGGGUACAAGUCCCAGGUCAGCUACAAUUCACAUUU
UGAUAGUCAUUUUACCCUGAAGUUCCCGAAGGGUCAUCGUUUACUUUAUA
GGGCGUUGCGCCGUAGUAUGACG
..........((((.(((.......))).)))).(((((((........))).))))......(((((...........)))))...((((((((....(.((((...)))).))))).)))) (-29.10)

Length sequence

: 123

Length match:

120