Alignments: vv v v vv v vv vv v NC
:::::{{{{{-{{{--{{{{--{{{{[[[[[[[[--[[[[[[[,,,,,,,,,,,,,,,,<<<<<<<___>>>>>>><<<<<-- CS
RF01390 1 GUUUugcggCauccUCuGCcCuGGugGCcgcugCUCCgGCaGCAGuaCUGCUUUGCGCcgCCaGuGAUGCgCuGGuauCaGAU 83
U U GCG A::: CUG : UGG C: U:CU C GC GC G C C G +G: G UGC :UAU G U
gi_545778205_gb_U000 935665 UUGUGGCGCAACUGGCUGUUGUGGCUGCUGAUACUGCUGCUGCGGCGCAACCG---GUUGUUGCGGCUGCU--GAUAUU-GCU 935589
***************************************99998887776654...444444456666664..577876.889 PP
v v v vvv v v v v NC
-<<<-<<<<<______>>>>>->>>--->>>>>((-((((((((-((((((-((((-(((((,<<____>>,,,,<<----<< CS
RF01390 84 GCGGCGGCguGagUGGauGCCUCCGAUGCuGauGaCgaGGcGGCUgccGCgccggcuGCcGcugcAcuugcuGaCGcugcugc 166
GC G CG A GG UG C G UGCU AU: G :GCUGC GC:C : C GC G:UG: U:CUGA CUGC :C
gi_545778205_gb_U000 935588 GCUGUGGCGCAACCGGUUGUUGCGGCUGCUGAUAUU---GUGGCUGCGGCGCAACCGGCUGUUGUGGCUGCUGAUACUGCGGC 935509
9************************99998888765...5669********************************9*999998 PP
v v v v vvv v vv NC
<<~~~~~>>>>---->>,)))))-))))-))))))-))..))))))-..)),,,,]]]]]]]--]]]]]]]],,,,<~~~~~~ CS
RF01390 167 gu*[9]*acgcUUUUgCugCgGCugccgacGCggcUGC..CgCCucu..uCcGAcGCuGCcGccGcagcgGCuGACg*[ 6]* 249
: :G:U UUG :C GCUG : :GC GCUGC : C++C : G +GC GC GC+G:A :G U A :
gi_545778205_gb_U000 935508 UG*[9]*UGGUUGUUGCGGCUGCUGAUAUUGCUGCUGCggUGCAAC-cgGUUGUUGCGGCUGCUGUACAGGUUCAAC*[23]* 935406
65..5..457888888888888888888888888888843333333.237888889999999999998888887766...9.. PP
v v vv NC
>,,}}}}}}}}--}}}-}}}}}:::::::: CS
RF01390 250 cAucaCCgGCacuggagGccgccUgugUUU 280
: CC: CA+ ::: CGC U++ UU
gi_545778205_gb_U000 935405 GUGGACCAUCAUCCAGCAACGCUUUCAUUG 935375
58899************************* PP
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