gi_545778205_gb_U000_91

cmsearch-Rfam

Family :

isrK

Id:

RF01394

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses;

Ontology:

Not found

Description:

not description

Score:

25.5

E-value:

0.0041

From sequence:

1645110

To sequence:

1645029

Alignments:

                                                                                                         NC
                               <<<<<<<______>>>>>>><~~~~~~>------------------....-<<<<<<_____>>>>>>::::: CS
               RF01394       1 GCacCcGCAAAAUCgGguGCC*[14]*GgAaauuaaacggggcaaa....cagcCGCggcuuGCGgcuUUUUU 77     
                               GC:  :G  AAAUC:  :GCC      G A+  U AACG + C  +    +A:CCGC ++  GCGG:UUUUU 
  gi_545778205_gb_U000 1645110 GCGGGGGAGAAAUCCCUCGCC*[16]*GCAUCCUCAACGCACCCGCacuuAACCCGC-UUCGGCGGGUUUUUG 1645029
                               ********************8...9..555555555455554444478899******.9************** PP

RNAfold
>gi_545778205_gb_U000_91
AAAAACCCGCCGAAGCGGGUUAAGUGCGGGUGCGUUGAGGAUGCCUGCCA
CAUCAGAGGUGGCGAGGGAUUUCUCCCCCGC
...(((((((....)))))))....(((((.(....((((((.((((((((.......))))).))).).))))))))))) (-35.70)

Length sequence

: 81

Length match:

80